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ZIRC
ZFIN ID: ZDB-GENE-021217-2
Gene Name: UTP25 small subunit processor component
Gene Symbol: utp25
Sequence Ontology ID : SO:0000704

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Previous Names: chunp6870, def, diexf, dj434o14.5l, fc51g08, fi05f05, lily liver, lly, wu:fc51g08 (1), wu:fi05f05

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have U3 snoRNA binding activity and rRNA binding activity. Involved in several processes, including digestive system development; maturation of SSU-rRNA from tricistronic rRNA transcript  ...
GENE EXPRESSION
All Expression Data: 9 figures from 5 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63753]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi429Tg Transgenic Insertion Intron 2 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa1495 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10886 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35530 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH utp25 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH utp25 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein catabolic process (more)
    Cellular Component nucleolus (more)
    Molecular Function rRNA binding (more)
    GO Terms (all 15)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR010678 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF06862 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA utp25-201 (1) 2720
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM utp25
    MARKER RELATIONSHIPS
    utp25Contained in: [BAC] DKEY-161O1 (1) (order this)
    utp25Encodes: [BAC END] zk13n6.sp6
    [EST] fc51g08 (1), fi05f05
    [cDNA] MGC:63753 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_173273 (1) 2445bp
    Genomic GenBank:CR559941 (1) 89710bp
    Select Tool
    Polypeptide UniProtKB:Q6PEH4 (1) 753aa
    Sequence Clusters UniGene:75940 (1)
    Sequence Information (all 17)
    ORTHOLOGY for utp25 (Chr: 13)
    CITATIONS (39)