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ZIRC
ZFIN ID: ZDB-GENE-020802-3
Gene Name: histocompatibility (minor) 13
Gene Symbol: hm13
Sequence Ontology ID : SO:0000704

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Previous Names: cb228 (1), spp (1), wu:fc11a06, zgc:86862

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have aspartic endopeptidase activity, intramembrane cleaving. Involved in regulation of neuron apoptotic process. Predicted to localize to the integral component of cytoplasmic side of  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la022786Tg Transgenic Insertion Unknown Unknown DNA
sa24231 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hm13 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hm13 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of neuron apoptotic process (more)
    Cellular Component integral component of membrane (more)
    Molecular Function aspartic-type endopeptidase activity (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006639 (1)
  • InterPro:IPR007369 (1)
  • Pfam:PF04258 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA hm13-002 (1) 749
    hm13-003 (1) 1880
    mRNA hm13-201 (1) 1953
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM hm13 No data available
    MARKER RELATIONSHIPS
    hm13Contained in: [BAC] DKEYP-44B8 (1)
    hm13Encodes: [EST] cb228 (1) (order this), fc11a06 (1), IMAGE:6903340 (1) (order this)
    [cDNA] MGC:56660 (1) (order this), MGC:86862 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212572 (1) 1985bp
    Genomic GenBank:BX323461 (1) 169310bp
    Select Tool
    Polypeptide UniProtKB:Q6IQA7 (1) 366aa
    Sequence Clusters UniGene:20331 (1)
    Sequence Information (all 22)
    ORTHOLOGY for hm13 (Chr: 23)
    CITATIONS (23)