Gene

odc1

ID
ZDB-GENE-010816-1
Name
ornithine decarboxylase 1
Symbol
odc1 Nomenclature History
Previous Names
  • odc
  • CHUNP6922
  • fc54f04
  • fi06d08
  • ornithine decarboxylase
  • wu:fc54f04 (1)
  • wu:fi06d08 (1)
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to have ornithine decarboxylase activity. Involved in eye photoreceptor cell development. Predicted to localize to cytoplasm. Is expressed in neuromast and ovary. Human ortholog(s) of this gene implicated in colorectal cancer. Orthologous to several human genes including ODC1 (ornithine decarboxylase 1).
Genome Resources
Note
None
Expression
All Expression Data
16 figures from 15 publications
Cross-Species Comparison
High Throughput Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With odc1 Human Ortholog
No data available
Associated With odc1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
Conserved_site IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site
Domain IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal
Domain IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal
Family IPR000183 Ornithine/DAP/Arg decarboxylase
Family IPR002433 Ornithine decarboxylase
Homologous_superfamily IPR009006 Alanine racemase/group IV decarboxylase, C-terminal
Homologous_superfamily IPR029066 PLP-binding barrel
Domain Details Per Protein
Protein Length Alanine racemase/group IV decarboxylase, C-terminal Orn/DAP/Arg decarboxylase 2, conserved site Orn/DAP/Arg decarboxylase 2, C-terminal Orn/DAP/Arg decarboxylase 2, N-terminal Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Ornithine/DAP/Arg decarboxylase Ornithine decarboxylase PLP-binding barrel
UniProtKB:Q9DGJ4 461
UniProtKB:F8W2D7 31
UniProtKB:F8W507 116
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-odc1 monoclonal IgG2b Mouse
  • WB
Sigma-Aldrich
3
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Ensembl Gene Tree
Citations