Genomic Feature

au59

ID
ZDB-ALT-180207-1
Name
au59
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Gross Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 1: 26375504 - 26375513 (GRCz11) (1) Details
Nucleotide change
ATAGATTTAA/-
Variant Notes
10bp deletion predicted to cause a frameshift beginning at amino acid (aa) 407,  ...
c.1,219_1, 229delATAGATTTAA, p.Ile407Thrfs*3 ;
protein truncation before the  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GTTTTGCAGCTGAGCAAAAGAAGCCTGCTTATTCTCTGTCTGATCTCCCAGAGCTAAGTCAGAAAGATTCAGAGTCTAATGTGCCATCACAGACAGTCGTCAATGGTTCCTCACAAATTCAAGAAGATAGAGAAGCCCTTCCAAATGACTCTGAGTGTGTAAACATGTTCTCCAAATCCAATCAGAATTTAAGTCATGGATCTTATACATTGCCCCCGGTGACAGCAGGTTCCCCCTCACAAACCTCTCAGACAGGTCAGTATAACCCACAGATTAAAGTGCCACAGAAAAAAACAACTGATGAAAACCTCCATGGCAATAGAGACTTTTCCTTGCTTCAGCAACAGACTCATGAGCCACAAGCAGTAGAGAGCAAGTTGATTCCCCAGGCATGTACTTCCCCTTCTCAAAATCGAAACAATGATCAAGACAACAAGTCTAAATTAGGACTAGAAAAAACACTGTCAAAGGGTACAGATCCATCATCCCAGATGGAATGG
ATAGATTTAA/- ACTCAACTTCTGCTTCAACACCATCTACTGAACACTCCCAGATGTGGGATTTGTTCCTTCCACAGACCAACATACAGCAACATACAGTCCCACAGAGTCAAAGTCAATGTATAAATTCCATTCCCCCAAACAACTTTCAGTCTCACAATTTCAGTAATTCCAGTTTTCCCTCACATGAAATTGAGGCACAAGAGAACAAAAACATGCTACCTCCTACACGGTTTCCCCATAGTGCTGCCCCTGAAAGTCAACAGAGAAATTCTGGTATGCACAATCATATTAACATGCAATTTAACAACCCGCAACATATGTCCCAGAAATTATGCAAAAATGATCAAGACCAGATACTATCCCCAAGCTTCCTTTCCCAGCTACCACCTACTGAAACTCATCAGCAAGCCACCAGCACATTTTCCAATCAGCTCCCTCAGGATAGGCAGAATATGCAAGCATCTCCACTATCACGAGATGCTTCCCGTAGTCAAGAAGTTGAGCCACTC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations