Mapping Details

Genome Browser Chr Position Assembly ZFIN JBrowse 2 40,102,774 - 40,113,628 GRCz12tu NCBI Map Viewer 2 40,102,774 - 40,113,628 GRCz12tu Ensembl 2 37,123,338 - 37,134,198 GRCz11 NCBI Map Viewer 2 37,123,338 - 37,134,191 GRCz11 UCSC 2 - GRCz11 Vega 2 37,140,881 - 37,151,741 GRCv10

Mapped Clones containing elavl1a
DKEY-52K20	Chr: 2 Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
2	457.18 cR	elrA	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
2	463.72 cR	hua	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
2	94.5 cM	elavl1	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
copb2	GENE	2	7.47 cR	Coutinho et al., 2004	Coutinho, et al. (2004. Dev. Cell 7(4):547-558) reports mapping copb2 to LG2,  ... Coutinho, et al. (2004. Dev. Cell 7(4):547-558) reports mapping copb2 to LG2, to within 7.47 cR of elavl1 by radiation hybrid mapping.
prkci	GENE	2	0.2 cM	Horne-Badovinac et al., 2001	Using half-tetrad analysis and genetic mapping techniques, Horne-Badovinac, et  ... Using half-tetrad analysis and genetic mapping techniques, Horne-Badovinac, et al. (2001. Current Biol 11:1492-1502.) report mapping prkci 0.2cM proximal to elavl1 on LG02. The authors physically mapped prkci using YACs and PACs in a chromosome walk.
z11023	SSLP	2		Parsons et al., 2002	Parsons, et al. (2002. Dev 129:3137-3146.) report using half tetrad analysis to map lamc1 to LG2. They localized lamc1 to a 3.4 cM interval between z11023 and z7632 on the MGH mapping panel. The elavl1 gene is within this interval and was used as a starting point for a chromosome walk. lamc1 was found to be on YAC 148F11, approximately 1.6 cM from z11023 and approximately 1.8 cM from z7632.
z7632	SSLP	2		Parsons et al., 2002	Parsons, et al. (2002. Dev 129:3137-3146.) report using half tetrad analysis to map lamc1 to LG2. They localized lamc1 to a 3.4 cM interval between z11023 and z7632 on the MGH mapping panel. The elavl1 gene is within this interval and was used as a starting point for a chromosome walk. lamc1 was found to be on YAC 148F11, approximately 1.6 cM from z11023 and approximately 1.8 cM from z7632.
lamc1	GENE	2		Parsons et al., 2002	Parsons, et al. (2002. Dev 129:3137-3146.) report using half tetrad analysis to map lamc1 to LG2. They localized lamc1 to a 3.4 cM interval between z11023 and z7632 on the MGH mapping panel. The elavl1 gene is within this interval and was used as a starting point for a chromosome walk. lamc1 was found to be on YAC 148F11, approximately 1.6 cM from z11023 and approximately 1.8 cM from z7632.

OTHER MAPPING INFORMATION

Chr 2 Parsons et al., 2002 Parsons, et al. (2002. Dev 129:3137-3146.) report using half tetrad analysis to map lamc1 to  ... Parsons, et al. (2002. Dev 129:3137-3146.) report using half tetrad analysis to map lamc1 to LG2. They localized lamc1 to a 3.4 cM interval between z11023 and z7632 on the MGH mapping panel. The elavl1 gene is within this interval and was used as a starting point for a chromosome walk. lamc1 was found to be on YAC 148F11, approximately 1.6 cM from z11023 and approximately 1.8 cM from z7632.

Markers Encoded by elavl1a
fa25f08 Chr: 2 Details
fb59a02 Chr: 2 Details