ZFIN ID: ZDB-GENE-000823-7

Mapping Details

Gene Name:	homeobox B6b
Symbol:	hoxb6b

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	12	28,940,227 - 28,941,650	GRCz12tu
NCBI Map Viewer	12	28,940,227 - 28,941,650	GRCz12tu
Ensembl	12	27,127,139 - 27,128,768	GRCz11
NCBI Map Viewer	12	27,127,058 - 27,128,480	GRCz11
UCSC	12	-	GRCz11
Vega	12	27,035,779 - 27,037,408	GRCv10

Mapped Clones containing hoxb6b
BUSM1-227H09	Chr: 12 Details
DKEY-11C5	Chr: 12 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sud137	12	27,127,567 - 27,127,577	GRCz11	DIRECT		Maeno et al., 2024
	12		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
12	56.8 cM	hoxb6b	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
hoxb1b	GENE	12		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxb8b, hoxb6b, hoxb5b, and hoxb1b are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG12.
hoxb8b	GENE	12		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxb8b, hoxb6b, hoxb5b, and hoxb1b are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG12.
hoxb5b	GENE	12		Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxb8b, hoxb6b, hoxb5b, and hoxb1b are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG12.

Chr 12

Amores et al., 1998

Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxb8b, ...