Gene

hoxb6b

ID

ZDB-GENE-000823-7

Name

homeobox B6b

Symbol

hoxb6b Nomenclature History

Previous Names

hoxa7
z-5

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anterior/posterior pattern specification. Predicted to localize to nucleus. Is expressed in several structures, including margin; mesoderm; nervous system; tail bud; and trunk. Orthologous to human HOXB6 (homeobox B6).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

18 figures from 11 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

eu750 (25 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With hoxb6b Human Ortholog

No data available

Associated With hoxb6b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR001827	Homeobox protein, antennapedia type, conserved site
Conserved_site	IPR017970	Homeobox, conserved site
Domain	IPR001356	Homeodomain
Domain	IPR020479	Homeodomain, metazoa
Family	IPR017995	Homeobox protein, antennapedia type
Family	IPR050296	Antennapedia-type homeobox
Homologous_superfamily	IPR009057	Homedomain-like superfamily