ZFIN ID: ZDB-GENE-980526-68

Mapping Details

Gene Name: signal transducer and activator of transcription 3 (acute-phase response factor)
Symbol: stat3
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 3 15,705,242 - 15,782,048 GRCz12tu
NCBI Map Viewer 3 15,705,242 - 15,782,048 GRCz12tu
Ensembl 3 17,030,665 - 17,107,445 GRCz11
NCBI Map Viewer 3 17,030,665 - 17,108,657 GRCz11
UCSC 3 - GRCz11
Vega 3 16,880,865 - 16,957,645 GRCv10
Mapped Clones containing stat3
CH211-209D14 Chr: 3 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
ia23 3 17,082,577 - 17,082,589 GRCz11 DIRECT Peron et al., 2020
ia55 3 17,104,182 - 17,104,184 GRCz11 DIRECT Tesoriere et al., 2025
ihb211 3 17,070,052 - 17,070,079 GRCz11 DIRECT ZFIN Staff
ihb212 3 17,070,053 - 17,070,060 GRCz11 DIRECT ZFIN Staff
mdu35 3 17,070,165 - 17,070,168 GRCz11 DIRECT Sobah et al., 2024
mdu36 3 17,093,026 - 17,093,033 GRCz11 DIRECT Sobah et al., 2024
sa938 3 15,755,811 GRCz12tu DIRECT Sealy et al., 2025
3 17,081,226 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 16,931,426 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 16,701,207 Zv9 DIRECT Busch-Nentwich et al., 2013
sa10162 3 15,765,137 GRCz12tu DIRECT Sealy et al., 2025
3 17,090,552 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 16,940,752 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 16,710,533 Zv9 DIRECT Busch-Nentwich et al., 2013
sa12185 3 15,769,404 GRCz12tu DIRECT Sealy et al., 2025
3 17,094,819 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 16,945,019 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 16,714,800 Zv9 DIRECT Busch-Nentwich et al., 2013
sa15744 3 15,744,708 GRCz12tu DIRECT Sealy et al., 2025
3 17,070,131 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 16,920,331 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 16,690,112 Zv9 DIRECT Busch-Nentwich et al., 2013
sa16856 3 15,769,404 GRCz12tu DIRECT Sealy et al., 2025
3 17,094,819 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 16,945,019 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 16,714,800 Zv9 DIRECT Busch-Nentwich et al., 2013
stl27 3 17,072,854 - 17,072,860 GRCz11 DIRECT Liu et al., 2017
stl28 3 17,072,852 - 17,072,853 GRCz11 DIRECT Liu et al., 2017
zf3573 3 17,064,591 - 17,064,601 GRCz11 DIRECT Xiong et al., 2017
zf3574 3 17,064,598 - 17,064,602 GRCz11 DIRECT Xiong et al., 2017
zf3708 3 17,070,165 - 17,070,169 GRCz11 DIRECT Wang et al., 2021
ia23 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
ihb211 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
ihb212 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
mdu35 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
mdu36 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa938 3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa10162 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa12185 3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa15744 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa16856 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
stl27 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
stl28 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
umo68 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
zf3573 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
zf3574 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
zf3708 3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
3 36.9 cM stat3 Mother of Pearl (MOP) Postlethwait, John H. Data
3 34.1 cM stat3 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
unp1137 STS 3 14.0 cR Lewis et al., 2004 Lewis and Ward (2004, Gene 38(1):65-74) mapped stat3 to LG3 on the T51 panel using ESTs, STSs and SSLPs.
z6566 SSLP 3 3.0 cR Lewis et al., 2004 Lewis and Ward (2004, Gene 38(1):65-74) mapped stat3 to LG3 on the T51 panel using ESTs, STSs and SSLPs.
unp1142 STS 3 13.0 cR Lewis et al., 2004 Lewis and Ward (2004, Gene 38(1):65-74) mapped stat3 to LG3 on the T51 panel using ESTs, STSs and SSLPs.
fc75a07 EST 3 10.0 cR Lewis et al., 2004 Lewis and Ward (2004, Gene 38(1):65-74) mapped stat3 to LG3 on the T51 panel using ESTs, STSs and SSLPs.
fj43f12 EST 3 9.0 cR Lewis et al., 2004 Lewis and Ward (2004, Gene 38(1):65-74) mapped stat3 to LG3 on the T51 panel using ESTs, STSs and SSLPs.

OTHER MAPPING INFORMATION
Markers Encoded by stat3
fl59g06 Chr: 3 Details
fc15d02 Chr: 3 Details
Genomic Feature sa15744 is an allele of stat3
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