Genomic Feature

stl27

ID
ZDB-ALT-170405-2
Name
stl27
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Lila Solnica-Krezel lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 3: 17072854 - 17072860 (GRCz11) (1) Details
Nucleotide change
TGGAGCA/-
Variant Notes
mutant protein lacks almost all the critical functional domains of the Stat3  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted in Exon 5 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTTAATCTCGCTCAGCCACATGTGGATGGCATCATCTAAACCTGGGGTGTCCAAACTCGGTCCTGGAGGGTCAGTGTCTTGCAGATTTTAGCTTCATCCTTGCAGATGTGTTGAGGCAAATTGTTTCTAGAAAGCCTAGTAAGAGCTTGATTAGTTAGCGCAGGTGTGTCTGATTGGGGTTGGAACTAAACTTTGCTGGACACCGGCCCTCCAGGATCGTGTTTGGACATGCCTGATCTAAACTATTTTGAGTTTGTCCACTTTCAGCCACTTAATGTAACCACACATGTGGTTAAATGTATTCAGACACAAAAGACCAGCTACCCTCCACCTGAACTCTTGTTTACAGTGGTGTAAATGGTAATACCTCTCAGCTGACCACCTGTGACCATATGACTGAAAATGCATGTTATAACAATCTGAAAACTGAAAATACTAAAACTGAAACTAATATTTAGCTATTGCTTGGGTATAACCTCTTACTCATCCTCCACAGGACA
TGGAGCA/- GAAGATGAAAATGTTGGAGAATCTGCAGGATGATTTTGATTTCAACTACAAAACTCTTAAGAGTGCTGGAGGTATGACTGCATTGGAAATGTTGTTTTTTGGTCAGGGTTCCACAATATATAGTTTCAGCATCAATATTACAATGTGCATATCCACAATAGTCATATGGCAGGATGCACAGTGCCATGCAGGGATTATAGGTGAACAGGGACTACAATTTGAATTTTGTCATTTTGAAAATTTGTCATTTTGATATTAATTACAAATTTTAACCATTTTGGAATTTGTAAATTCATAATTTGTTCATTTTTTTCTGTTAATATGAGTTCAAGGCCTGTGATGCAATCAACTCTCTATATTTCTATATTCAATATCTGTATCTGACTTTCCAAAGACTTACCAAAAAATATAAAGCACAATTTTCTTTTCTCATTTTAAGGCTTTGTTTTTGTATTTATCTAGTTTATTATGCACTATACTATGTACCTTATAGATGTATT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations