Transcript

ottdart00000055514

ID

ZDB-TSCRIPT-141209-477

Name

ottdart00000055514 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

srrm1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000149790 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000149790.2|gene_biotype:protein_coding|ENSDARG00000001244.12 transcript_biotype:retained_intron gene_symbol:srrm1 cdna chromosome:GRCz11:17:25426116:25428940:1
ATATTGACACACGACAGAAATGGACGCGGGTTTTTTCCGC
GGCACCAGTGCGGAGCAGGATAACCGCTTCAGCAACAAAC
ACAAGAAACTCTTGAAGCAGCTGAAGTTTGCAGAATGTCT
GGAGAAAAAGGTGGATATGACCAAGGTCAACCTGGAAGTC
ATCAAGCCCTGGATCACCCAGCGTGTGACAGAGATACTTG
GCTTCGAGGATGATGTGGTCATTGAATTTGTCTTTAACCA
GCTGGAGGAAAAGGCCTGAACCAATATGGATCTTATTCCT
TGCATCTGAAGTATAGCACCAACTCCTAATTAGATCTCAA
CTGAGCCCAAAGTCTCTCTGAATCCAACTCTCCCTTGATG
ATGAGCTTTATTTTTTGAGGTGAGTTATGAGCAGGGCTTG
ACATTGTGCCAGTGGTAGAGTCATTTCAGCTTGATCATTT
GTGCCTTTCTGTTTTAGTCAAAGTTTAGCAGTACATCTTA
AACATAAAGGCCTGATTTATCACTTTTATGGAAATGAAAA
CTATTAAGGAATAAAATGAAAAGATGATTTTGCATGTAGG
ATGATAATGCAGTACAACATTGGAAGTGTAAGAGACTTTT
TTTATTTATTTA

OTTDART00000055514 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000055514|OTTDARG00000038724|ZDB-GENE-040426-2789 srrm1|no_translation srrm1-004 LG_ CU972452.10 Danio rerio protein_coding KNOWN, 612 bp
ATATTGACACACGACAGAAATGGACGCGGGTTTTTTCCGC
GGCACCAGTGCGGAGCAGGATAACCGCTTCAGCAACAAAC
ACAAGAAACTCTTGAAGCAGCTGAAGTTTGCAGAATGTCT
GGAGAAAAAGGTGGATATGACCAAGGTCAACCTGGAAGTC
ATCAAGCCCTGGATCACCCAGCGTGTGACAGAGATACTTG
GCTTCGAGGATGATGTGGTCATTGAATTTGTCTTTAACCA
GCTGGAGGAAAAGGCCTGAACCAATATGGATCTTATTCCT
TGCATCTGAAGTATAGCACCAACTCCTAATTAGATCTCAA
CTGAGCCCAAAGTCTCTCTGAATCCAACTCTCCCTTGATG
ATGAGCTTTATTTTTTGAGGTGAGTTATGAGCAGGGCTTG
ACATTGTGCCAGTGGTAGAGTCATTTCAGCTTGATCATTT
GTGCCTTTCTGTTTTAGTCAAAGTTTAGCAGTACATCTTA
AACATAAAGGCCTGATTTATCACTTTTATGGAAATGAAAA
CTATTAAGGAATAAAATGAAAAGATGATTTTGCATGTAGG
ATGATAATGCAGTACAACATTGGAAGTGTAAGAGACTTTT
TTTATTTATTTA

Related Transcripts

Transcripts related to srrm1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	srrm1-203 (1) Ensembl	Ensembl	889 nt	Select Tool ZFIN BLAST
aberrant processed transcript	srrm1-205 (1) Ensembl	Ensembl	803 nt	Select Tool ZFIN BLAST
mRNA	srrm1-201 (1) Ensembl	Ensembl	3,480 nt	Select Tool ZFIN BLAST
mRNA	srrm1-204 (1) Ensembl	Ensembl	3,517 nt	Select Tool ZFIN BLAST
mRNA	srrm1-208 (1) Ensembl	Ensembl	848 nt	Select Tool ZFIN BLAST
ncRNA	ottdart00000055512 (1) Ensembl	Ensembl	567 nt	Select Tool ZFIN BLAST
ncRNA	ottdart00000055514	Ensembl	612 nt
ncRNA	ottdart00000055516 (1) Ensembl	Ensembl	834 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations