Transcript

ottdart00000055512

ID

ZDB-TSCRIPT-141209-1700

Name

ottdart00000055512 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

srrm1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000149747 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000149747.3|gene_biotype:protein_coding|ENSDARG00000001244.12 transcript_biotype:retained_intron gene_symbol:srrm1 cdna chromosome:GRCz11:17:25426113:25428573:1
GCCATATTGACACACGACAGAAATGGACGCGGGTTTTTTC
CGCGGCACCAGTGCGGAGCAGGATAACCGCTTCAGCAACA
AACACAAGAAACTCTTGAAGCAGCTGAAGTTTGCAGAATG
TCTGGAGAAAAAGGTGGATATGACCAAGGTCAACCTGGAA
GTCATCAAGCCCTGGATCACCCAGCGTGTGACAGAGATAC
TTGGCTTCGAGGATGATGTGGTCATTGAATTTGTCTTTAA
CCAGCTGGAGGAAAAGGTAGACCCCCACCTTGCACTTCCC
GCTCTTGTTTTATTTTTTTATACACATGCTGCAGTCTATA
TTAGATGTGTTGTGCTTTGGAAAGAAGAGAAGGTTTGAAG
ATCAATGAATAACCGCTGACAGTTATTTGAAACATTTGTC
ATGTGAAGATGTAACAGCAGAAACATCTAACATCACAGTG
TTAAACTGTCTGCCTGATTTAAAAAAAGACAGAAAAGGGG
GTAAAAAGATATATTTCTCTCTGAAGAAATGATTTGTGAC
ACCGTTCCTTCTGAACAGCAATGTTCTAATGTTGATGTGA
TTTATGA

OTTDART00000055512 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000055512|OTTDARG00000038724|ZDB-GENE-040426-2789 srrm1|no_translation srrm1-002 LG_ CU972452.10 Danio rerio protein_coding KNOWN, 567 bp
GCCATATTGACACACGACAGAAATGGACGCGGGTTTTTTC
CGCGGCACCAGTGCGGAGCAGGATAACCGCTTCAGCAACA
AACACAAGAAACTCTTGAAGCAGCTGAAGTTTGCAGAATG
TCTGGAGAAAAAGGTGGATATGACCAAGGTCAACCTGGAA
GTCATCAAGCCCTGGATCACCCAGCGTGTGACAGAGATAC
TTGGCTTCGAGGATGATGTGGTCATTGAATTTGTCTTTAA
CCAGCTGGAGGAAAAGGTAGACCCCCACCTTGCACTTCCC
GCTCTTGTTTTATTTTTTTATACACATGCTGCAGTCTATA
TTAGATGTGTTGTGCTTTGGAAAGAAGAGAAGGTTTGAAG
ATCAATGAATAACCGCTGACAGTTATTTGAAACATTTGTC
ATGTGAAGATGTAACAGCAGAAACATCTAACATCACAGTG
TTAAACTGTCTGCCTGATTTAAAAAAAGACAGAAAAGGGG
GTAAAAAGATATATTTCTCTCTGAAGAAATGATTTGTGAC
ACCGTTCCTTCTGAACAGCAATGTTCTAATGTTGATGTGA
TTTATGA

Related Transcripts

Transcripts related to srrm1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	srrm1-203 (1) Ensembl	Ensembl	889 nt	Select Tool
aberrant processed transcript	srrm1-205 (1) Ensembl	Ensembl	803 nt	Select Tool
mRNA	srrm1-201 (1) Ensembl	Ensembl	3,480 nt	Select Tool
mRNA	srrm1-204 (1) Ensembl	Ensembl	3,517 nt	Select Tool
mRNA	srrm1-208 (1) Ensembl	Ensembl	848 nt	Select Tool
ncRNA	ottdart00000055512	Ensembl	567 nt
ncRNA	ottdart00000055514 (1) Ensembl	Ensembl	612 nt	Select Tool
ncRNA	ottdart00000055516 (1) Ensembl	Ensembl	834 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations