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ZIRC
ZFIN ID: ZDB-GENE-990415-208
Gene Name: platelet-derived growth factor receptor, alpha polypeptide
Gene Symbol: pdgfra
Sequence Ontology ID : SO:0000704

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Previous Names: pdgfr-a (1), etID309717.20 (1), wu:fc27f02, wu:fv91b12

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have platelet-derived growth factor alpha-receptor activity and platelet-derived growth factor binding activity. Involved in several processes, including animal organ development;  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
b1059 Point Mutation Unknown Missense ENU
la021462Tg Transgenic Insertion Unknown Unknown DNA
sa271 Point Mutation Unknown Premature Stop ENU
sa29348 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43427 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43428 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sk16 Point Mutation Intron 15 Splice Site, Exon Loss of Exon 14, Frameshift, Premature Stop ENU
    smh1300Gt Transgenic Insertion Intron 16 Unknown DNA
    Targeting reagents:
    DISEASE ASSOCIATED WITH pdgfra HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Gastrointestinal stromal tumor/GIST-plus syndrome, somatic or familial 175510
    Hypereosinophilic syndrome, idiopathic, resistant to imatinib 607685
    DISEASE ASSOCIATED WITH pdgfra VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cerebellum vasculature development (more)
    Cellular Component cilium (more)
    Molecular Function ATP binding (more)
    GO Terms (all 36)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pdgfra-201 (1) 6274
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pdgfra No data available
    MARKER RELATIONSHIPS
    pdgfraContained in: [BAC] CH211-176L11 (1) (order this), DKEY-97C6 (1) (order this)
    pdgfraEncodes: [EST] fc27f02, fv91b12
    [cDNA] cssl:d115 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131459 (1) 3788bp
    Genomic GenBank:BX276097 (1) 216655bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QNY7 (1) 1456aa
    Sequence Clusters UniGene:75077 (1)
    Sequence Information (all 28)
    ORTHOLOGY for pdgfra (Chr: 20)
    CITATIONS (56)