Gene
carf
- ID
- ZDB-GENE-070912-172
- Name
- calcium responsive transcription factor
- Symbol
- carf Nomenclature History
- Previous Names
-
- als2cr8
- si:ch211-195c14.1
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Description
- Predicted to have DNA binding activity and DNA-binding transcription activator activity, RNA polymerase II-specific. Predicted to be involved in cellular response to potassium ion and positive regulation of transcription from RNA polymerase II promoter in response to calcium ion. Predicted to localize to nucleus. Orthologous to human CARF (calcium responsive transcription factor).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR029309 | Calcium-responsive transcription factor |
Domain Details Per Protein
| Protein | Length | Calcium-responsive transcription factor |
|---|---|---|
|
UniProtKB:A0A8M9QJZ7
|
561 | |
|
UniProtKB:A0A8M9QJZ6
|
668 | |
|
UniProtKB:A0A8M9PSK7
|
664 | |
|
UniProtKB:B0UYY8
|
661 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
carf-201
(1)
|
Ensembl | 2,001 nt | ||
| mRNA |
carf-203
(1)
|
Ensembl | 2,916 nt | ||
| mRNA |
carf-204
(1)
|
Ensembl | 642 nt | ||
| mRNA |
carf-207
(1)
|
Ensembl | 1,653 nt | ||
| ncRNA |
carf-002
(1)
|
Ensembl | 864 nt | ||
| ncRNA |
carf-003
(1)
|
Ensembl | 754 nt | ||
| ncRNA |
carf-004
(1)
|
Ensembl | 477 nt |
Interactions and Pathways
No data available
Plasmids
No data available