Transcript

carf-002

ID

ZDB-TSCRIPT-090929-14597

Name

carf-002 Nomenclature History

Previous Names

als2cr8-002
als2cr8-003
si:ch211-195c14.1-003

Transcript Type

ncRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

carf (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000132770 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000132770.2|gene_biotype:protein_coding|ENSDARG00000019950.11 transcript_biotype:processed_transcript gene_symbol:carf cdna chromosome:GRCz11:9:13238817:13246526:1
AGGTATTACGTCCAGCTCCCTACAGAAAAAGCCCACCTGT
ACCATGATGTGGAGACTGTAAACCTGCCTCCTCTTCCAGA
TCAGATCTGCTTCACAGAAGACCATCCTCATGAAGAGGAA
GACACAGAAGAGCTGGGGTTTCAAGCCATGCAGGACGTCC
TTGTGGAGGATGGGGTATCCCTACCCGAGTCTCGACTACA
CCCGCTGGTGGCAGAGAAGATCTGTGAATTGGTGGCTCAT
GGTCATAACCAGGTCTACACCGTCCGCAAACAGCTCAGGA
GGTTTGTTGAACGTGAGATGTTCAAGTCAGAGGAAGTGCC
TGAGAGACACAATCTGTGTTACTTTCCCACCGTCAATGAC
ATCAAGAACCACATCCACGAGGCGCAGAAAACTCTTGGAC
CACTGGACGGTTCAGATAATGAGTTTCCTCTGAGAAGGAA
GAGCTCATGGAAGGAAGTGACACTCTTTCTTCAGAGGCTG
TGCATCTCTTCAGCTCCCTCACATCACTGCAGCCCAAGAT
CTTTGCACATCTACAGGAGCGCTTTTCTCTCATCTGATAG
ACCATTCAGCTCCAGCCGCCCTTGTGTCCAGTGGAAGACC
CTGCTCAACCTTTAACAGCAGCACCAGAAGCCCAAGAGCT
GTCCAGCCCTGCAGCCTCACAGCCTGCACTCCTGAGTCCA
TCCCAATTTCTCCAGTCTAGTCCCAGTGCTGGCGAAGGCA
GGTCTGTGTGTGAGACCCCGACCCTGCTTGGCATGAACCA
GCTAGTGAGTGTCTCTAATGCTGGAGCTAATGGAGGAATC
ACACAGATCCTGCTGGAGGATGGACAGGCTATTCCAGTCC
AGATTGTGGAGCCGGCAAACATAG

OTTDART00000033647 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000033647|OTTDARG00000025575|ZDB-GENE-070912-172 carf|no_translation CH211-195C14.1-002 LG_none CR753814.7,CR407547.14 Danio rerio protein_coding NOVEL, 864 bp
AGGTATTACGTCCAGCTCCCTACAGAAAAAGCCCACCTGT
ACCATGATGTGGAGACTGTAAACCTGCCTCCTCTTCCAGA
TCAGATCTGCTTCACAGAAGACCATCCTCATGAAGAGGAA
GACACAGAAGAGCTGGGGTTTCAAGCCATGCAGGACGTCC
TTGTGGAGGATGGGGTATCCCTACCCGAGTCTCGACTACA
CCCGCTGGTGGCAGAGAAGATCTGTGAATTGGTGGCTCAT
GGTCATAACCAGGTCTACACCGTCCGCAAACAGCTCAGGA
GGTTTGTTGAACGTGAGATGTTCAAGTCAGAGGAAGTGCC
TGAGAGACACAATCTGTGTTACTTTCCCACCGTCAATGAC
ATCAAGAACCACATCCACGAGGCGCAGAAAACTCTTGGAC
CACTGGACGGTTCAGATAATGAGTTTCCTCTGAGAAGGAA
GAGCTCATGGAAGGAAGTGACACTCTTTCTTCAGAGGCTG
TGCATCTCTTCAGCTCCCTCACATCACTGCAGCCCAAGAT
CTTTGCACATCTACAGGAGCGCTTTTCTCTCATCTGATAG
ACCATTCAGCTCCAGCCGCCCTTGTGTCCAGTGGAAGACC
CTGCTCAACCTTTAACAGCAGCACCAGAAGCCCAAGAGCT
GTCCAGCCCTGCAGCCTCACAGCCTGCACTCCTGAGTCCA
TCCCAATTTCTCCAGTCTAGTCCCAGTGCTGGCGAAGGCA
GGTCTGTGTGTGAGACCCCGACCCTGCTTGGCATGAACCA
GCTAGTGAGTGTCTCTAATGCTGGAGCTAATGGAGGAATC
ACACAGATCCTGCTGGAGGATGGACAGGCTATTCCAGTCC
AGATTGTGGAGCCGGCAAACATAG

Related Transcripts

Transcripts related to carf

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	carf-201 (1) Ensembl	Ensembl	2,001 nt	Select Tool ZFIN BLAST
mRNA	carf-203 (1) Ensembl	Ensembl	2,916 nt	Select Tool ZFIN BLAST
mRNA	carf-204 (1) Ensembl	Ensembl	642 nt	Select Tool ZFIN BLAST
mRNA	carf-207 (1) Ensembl	Ensembl	1,653 nt	Select Tool ZFIN BLAST
ncRNA	carf-002	Ensembl	864 nt
ncRNA	carf-003 (1) Ensembl	Ensembl	754 nt	Select Tool ZFIN BLAST
ncRNA	carf-004 (1) Ensembl	Ensembl	477 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations