Transcript

carf-003

ID

ZDB-TSCRIPT-131113-1398

Name

carf-003 Nomenclature History

Previous Names

ch211-195c14.1-003

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

carf (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000155728 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000155728.2|gene_biotype:protein_coding|ENSDARG00000019950.11 transcript_biotype:retained_intron gene_symbol:carf cdna chromosome:GRCz11:9:13235020:13239029:1
TCCTTTGTCTAAAAAACCCGTTTCCAGCAAGATGGTGCAA
TGATGTCAAGCTAATGAGTTTTGTTAAATCTGTATTGTGT
GTGAGCAGAAGATCGGGGACTCGTACCGTGGTTACTGTAA
CACAGAGACCGAGCTGGAGGCTGTTCTGCTTCAACATAAG
CAGCAGACCCACGCTGTTTTTGGCACCCGTCAGTCCCCAT
CCCCAGCTAAACCTGCCACCAGGCTTATGTGGAAATCACA
GTATGTGCCCTACGATGGCATTCCCTTCGTTAATGCAGGT
AGCAGAGCCATTGTAATGGAATGCCAGTTTGGTCCACGAA
GGAAGGGCGTCCAACCTAAAAAAGGATCAGAGCAAGAAAA
GTATCAAAACAAGCTCTACAAAGCTACCTGTCCTGCCAGA
ATATATATCAAGAAAGTCCGAAAGTTCCTGGAGTACAAGG
TTCCAATAGACCCCAAAGTGAACAAGAAGGTGGTGCGACA
AGAGCAGGAGAAAGCCTTCTTCAACCTTAAGAACAGTTTA
TGGGACGATGGAGGTGTTGTAAGGTATTACGTCCAGCTCC
CTACAGAAAAAGCCCACCTGTACCATGATGTGGAGACTGT
AAACCTGCCTCCTCTTCCAGATCAGATCTGCTTCACAGAA
GACCATCCTCATGAAGAGGAAGACACAGAAGAGCTGGGGT
TTCAAGCCATGCAGGACGTCCTTGTGGAGGATGGGGTATC
CCTACCCGAGTCTCGACTACACCCGCTGGTGGCA

OTTDART00000059321 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000059321|OTTDARG00000025575|ZDB-GENE-070912-172 carf|no_translation CH211-195C14.1-003 LG_none CR753814.7,CR407547.14 Danio rerio protein_coding NOVEL, 754 bp
TCCTTTGTCTAAAAAACCCGTTTCCAGCAAGATGGTGCAA
TGATGTCAAGCTAATGAGTTTTGTTAAATCTGTATTGTGT
GTGAGCAGAAGATCGGGGACTCGTACCGTGGTTACTGTAA
CACAGAGACCGAGCTGGAGGCTGTTCTGCTTCAACATAAG
CAGCAGACCCACGCTGTTTTTGGCACCCGTCAGTCCCCAT
CCCCAGCTAAACCTGCCACCAGGCTTATGTGGAAATCACA
GTATGTGCCCTACGATGGCATTCCCTTCGTTAATGCAGGT
AGCAGAGCCATTGTAATGGAATGCCAGTTTGGTCCACGAA
GGAAGGGCGTCCAACCTAAAAAAGGATCAGAGCAAGAAAA
GTATCAAAACAAGCTCTACAAAGCTACCTGTCCTGCCAGA
ATATATATCAAGAAAGTCCGAAAGTTCCTGGAGTACAAGG
TTCCAATAGACCCCAAAGTGAACAAGAAGGTGGTGCGACA
AGAGCAGGAGAAAGCCTTCTTCAACCTTAAGAACAGTTTA
TGGGACGATGGAGGTGTTGTAAGGTATTACGTCCAGCTCC
CTACAGAAAAAGCCCACCTGTACCATGATGTGGAGACTGT
AAACCTGCCTCCTCTTCCAGATCAGATCTGCTTCACAGAA
GACCATCCTCATGAAGAGGAAGACACAGAAGAGCTGGGGT
TTCAAGCCATGCAGGACGTCCTTGTGGAGGATGGGGTATC
CCTACCCGAGTCTCGACTACACCCGCTGGTGGCA

Related Transcripts

Transcripts related to carf

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	carf-201 (1) Ensembl	Ensembl	2,001 nt	Select Tool ZFIN BLAST
mRNA	carf-203 (1) Ensembl	Ensembl	2,916 nt	Select Tool ZFIN BLAST
mRNA	carf-204 (1) Ensembl	Ensembl	642 nt	Select Tool ZFIN BLAST
mRNA	carf-207 (1) Ensembl	Ensembl	1,653 nt	Select Tool ZFIN BLAST
ncRNA	carf-002 (1) Ensembl	Ensembl	864 nt	Select Tool ZFIN BLAST
ncRNA	carf-003	Ensembl	754 nt
ncRNA	carf-004 (1) Ensembl	Ensembl	477 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations