FIGURE

Fig. 5

ID

ZDB-FIG-240731-39

Publication

Li et al., 2024 - Genome sequencing of Coryphaenoides yaquinae reveals convergent and lineage-specific molecular evolution in deep-sea adaptation

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Fig. 5

Genetic innovations associated with the adaptation of hydrostatic pressure. (a) Phylogeny of the TMAO-generating enzyme flavin monooxygenase 3 in 15 teleosts. The red dots represent the fmo3 gene in C. yaquinae. The gene nomenclature for the fmo3 gene family follows Wang et al. (2019). (b) The evolution of fmo3 gene expression in three fish species explains the reduction in multiplicity. (c) Three-dimensional views of the HSP70, highlighting deep-sea cod (blue arrow) and rough abyssal grenadier (red arrow) specific amino acid substitutions. (d) The HSP90B1 has an A202S and an A206S convergent AA replacement in abyssal–hadal and hadal fish, which is conserved among teleosts. Additionally, a K208Q and a K208R are shown in P. swirei and C. yaquinae, respectively. (e) The VCP has an S612T convergent AA replacement in abyssal–hadal and hadal fish. Additionally, an A391F and an A391L are shown in P. swirei and C. yaquinae, respectively.

Expression Data

Expression Detail

Antibody Labeling

Phenotype Data

Phenotype Detail

Acknowledgments

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