Figure 1—figure supplement 2.

Sci-RNA-seq data quality metrics across backgrounds

(A, B) Counts of unique molecular identifiers (UMIs) and unique genes expressed across annotated cell types (shown are medians with boxes spanning interquartile ranges; vertical lines indicate farthest observations of data with outlier samples shown individually). (C) UMAP plot with cells from all genetic backgrounds, colored by cell type annotation with major groups labeled (cell n = 144,466). (D) The same UMAP plot as (C) with cells colored by their genetic background of origin (wild-type, eda-/-, hypoTH, and bnc2-/-). (E) Recovered cell counts from each genetic background and boxplots displaying UMI counts across backgrounds. (F) Cell type percentages across backgrounds. Colors correspond to cell types in (C).

Expression Data

Expression Detail
Antibody Labeling
Phenotype Data

Phenotype Detail
Acknowledgments
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