Gene

efhd2

ID

ZDB-GENE-060531-152

Name

EF-hand domain family, member D2

Symbol

efhd2 Nomenclature History

Previous Names

si:dkey-72l14.9
wu:fb80e07

Type

protein_coding_gene

Location

Chr: 8 Mapping Details/Browsers

Description

Predicted to have calcium ion binding activity. Orthologous to human EFHD2 (EF-hand domain family member D2).

Genome Resources

Note

orthology from PubMed ID 21244694, to be added to ZFIN.

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With efhd2 Human Ortholog

No data available

Associated With efhd2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR002048	EF-hand domain
Family	IPR040365	EF-hand domain-containing protein D1/2
Homologous_superfamily	IPR011992	EF-hand domain pair

Domain Details Per Protein

Protein	Length	EF-hand domain	EF-hand domain-containing protein D1/2	EF-hand domain pair
UniProtKB:Q1LVD7 InterPro	233

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
aberrant processed transcript	efhd2-201 (1) Ensembl	Ensembl		3,101 nt	Select Tool ZFIN BLAST
mRNA	efhd2-202 (1) Ensembl	Ensembl		1,576 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations