ZFIN ID: ZDB-TSCRIPT-090929-16253
Transcript Name: efhd2-201
Previous Names: efhd2-002, si:dkey-72l14.9-002

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Transcript Type: aberrant processed transcript
Annotation Status: nonsense mediated decay
Strain: TU
Non Reference Strains:
Associated with Genes:
SEQUENCE
OTTDART00000035655 (1) [ Show ] (double-click sequence to select) [Download]
Select Analysis Tool
>tpe|OTTDART00000035655|OTTDARG00000018357|ZDB-GENE-060531-152 efhd2|OTTDARP00000028636 DKEY-72L14.9-002 LG_ BX784025.12 Danio rerio protein_coding KNOWN, 3101 bp
CGGAGGCGTCATCATCACACGCACGAGCGCTGTCCGTTTG
AATCACGGGCTGTACAGTCGAGTATCGCTTCACACAGCTA
CAATAAAAGTCGGATGATTTGCATTTTAAAACCTATTTAA
CCACATGCTTATCTGAGTTTGGATTTAACGCACTAAACCT
TTACATGGACTGAGCGCTTTAGGGAATTCTGCGTGTTTCC
CTGGTGCATTAACCAGTAGTTAGATTGCGGATTAATACGA
AATGGCAACGGACGAGCTGTCATCGAAGCTGAACCGTCGG
CTGAAGATCGAGGATGGCTCGCACGAGCCGGCGGCGGCCC
TGGATGAGGCTCACGAGAACGGAGCGCACGATAAACCGAC
CACGAGCAGCGCGGACTCCGAGCTCGGAGCCAAACTGCAG
CGGCGCGGGGAGCTGAACGAGGGCGTCGGTGAACACCAGC
AGCCCAGCATGAAGGTGTTCAACCCCTACACCGAGTTCAA
GGAGTTCTCGAGGAAGCAGATCAAAGACATGGAGAAGATG
TTCAAACAGTATGATTCAGAGAAGGATAACTACATCGACT
TGATGGAGCTGAAGCTGATGATGGAGAAACTGGGAGCTCC
TCAGACTCACCTGGGCCTGAAGAACATGATCAAAGAGGTG
GATGAAGACCTGGACGGCAAACTCAGTTTCAGAGAATTTC
TCCTTATCTTCAGAAAGGCAGCAGCAGGAGAGCTGGCAGA
GGACAGCGGCCTTCATGTCCTGGCACGTTTGTCAGAGATA
GACGTGTCGACTGAGGGAGTGAAAGGAGCCAAATCATTCT
TTGAGGCTAAGGTACAGGCTATTAACGAATCCAACCGGTT
TGAGGCCGAAATCCGTCTGGAGCAGGAGGAGAAGAAGAAG
CAGGCAGAGGAGAAGAAACAAAGACAAGCCGCATTCAAAG
AGCTGAAGTCAGCCTTCAAATAACCGCATCCACCTCCTCC
TTTTACTCATCTACGTCTGTCTGTCATCAGAGTCCCCGCA
ATCAGAGATACTATGCAAGGCTCAAAAATCCATGCAGATT
CATCTTCCTGAGAGATCTGTTTTATCCTTGCCTCTTTCTC
TCGCTCGCTCAGGCTGATTTCGAATGTGAAGCCAGACACT
GATCTCAGTACACTGGATTGGATTAGTTTTCTTTCATTTG
CATGTGTATGTATGTCTGTTTTCACCATCAGTATCGTCAT
TTTGCATCTTGTTCTCGTTAAAGTGACCAAATTTCATTAA
ATCTAATGCTTAAGTAGTTTTAAAATAGTTTTTCTTTTAA
ATCTTTTATTGTTCTCAGTATGCCGTTTCCAATCCCCTGT
ATTCATATCAGTGGTAATTGCACTAGCGCAAAACACAAGC
AGGAAATACTTTCCGCTGTACCATGACTAATGAAACTTTC
ATTGCTGGCCATTTTAACTCGAGAGGGCAAACATCAGATC
TCTCATTCACGGATGAATTAGGAGCGTTAAGTGGTCAGTA
TTTTTTCTGAGTCGATAGACGGAGAGCTGGTTTGGGGGTG
TATGTGCATGTGTGGTGATGGTTGTAATGGTGTTTGTTTA
ATTTGCATGGTCACTGTGGTGTCGTTTTCGCTATAGGGTA
CACTTTAGGTGTCCAGTGTTAAATGTGGCACACGCTAACC
TAAAACTGGTATACAAATCGCAACGAGACATAGCTTTAAA
TTTAAAATAGCTTACAAAATGTAAGAAATTGCAACATAAT
ATTTTGAGTTTGCGTAATTTTTGTTGATGGAGGCGTTTCG
TTAGGGCAAAGTCTAACCTGAATCCCTGTACTTTGTGCTT
CCATGTGTGCTGATCAAGTTACTGTGATATGAGGTTGATC
AGATGCATCAAGTGGAGTGAAATCAGATTTGAAGACCGTT
TATTCACCTTCATGTCATTCCAAGCCTATCTGCCTTTTTT
TTTTTTTTTTTTTTTTTGTGCAAACCACATGGTTTTTTTT
ATGTTGGCAATCTAAATGTTTTTTTTTTTGTTTTTTTTGT
TCCAGACTTTTGTTTTTGTATGTGTATTAAAGTTAATGGA
GAATAATTTTTCCTTTTTTTTAATATATATATATATATAT
ATATTAAAAATATACAATATTGTTGGCATTTGCTATGCTT
AATGTTGTTCCTTGTCTCTGTGTTCTGAGTCACTGGTAAA
TGTTCTTGTTTGCTGACTTGTTCTGTGGAAAGTCAAACAA
AAGGTGTATAAATATTTCGATCTTCCAGTCTTCACAGCCA
TCCACGTTTTCTTTTACAGTTATCTGCTGTTTAAACTCAA
AGTATTTTGAATTTAAAGGGTAAATATAGTAGTGTGTTTG
TTAATATTTGGTCAACCAAGAGTCGGATTTCGACACCAAT
CAATTATTGCATTTCTTTAGAAGCCATAAATAGTTCTGTC
ATTTCTTTTGAGATATCTTTTTTTAGCTGATCTGTTCTTA
TTGTGCCAAATGATTTCACACTTCTGTTCTGTGTCAGGCT
TATTTTAGTAGGACATTCCACTGATATTAGTTGAGTTTAG
ACTAAACATCATTGATCTAAAATGTTTTGCATTTGTTTTT
GAATGTAAAATGTTTTTAAAATGTAATAAAATTGTTGAAA
TTTAAGTTGTTCATTAATTAAAACCCTTTTTGCAGTTTTG
GTTTTAGAATATTAATATTTGCACAAATGCATAACTACAG
CTGAGCTTTGGCAGTATTGACTTTAATGGATTTCTGTGAA
AATCTGCACCTTGTAAAGCAGATTACACAAACAGCACAAT
GTTGTTTTTGGTATTTGATCATTTTTCTGTGAAATGTAAT
GCTAGGAGGATGAGGAATGAGTGTTGTAGTCTTAACGATT
TCATCTGATGGCATGTTTTTTTTATCTTTTTGTTCGTCAT
TCCAGCGACTTGACAATGGTTGAGAAGGCATTGAACCATC
CTGACCATATCTGTACCTTACTGTCAGCGTCTGTGTCAGT
CGAATCTGGTGGTTATGGTATCATACTCTCGTAGGCTTAT
ACATATTGATATGTGGCTTCTATATGCACATTTATTTTTG
ATTTTGTTACTAAAGTGTATGATTCTTGTGACAATAAAAC
AAAATGCTTTTAATTTGGAAA

efhd2 TRANSCRIPTS
Type Name Length (nt) Analysis
aberrant processed transcript efhd2-201 3101
mRNA efhd2-202 (1)    Ensembl 1576
SEGMENT (CLONE AND PROBE) RELATIONSHIPS
efhd2-201 Contained in:
[BAC] DKEY-72L14 (1) (order this)

Genome Resources: Vega_Trans:OTTDART00000035655 (1),  Ensembl_Trans:ENSDART00000047008 (1)
PROTEIN PRODUCTS No links to external site
ZEBRAFISH SUPPORTING SEQUENCES
Type Accession # Length (nt/aa) Analysis
RNA GenBank:BC133081 (1) 3170 nt
CITATIONS (2)