Research
General Information
ZIRC
ZFIN: Gene: edem1
ZFIN ID: ZDB-GENE-040426-808

Gene Name:ER degradation enhancer, mannosidase alpha-like 1
Gene Symbol: edem1
Previous Names: zgc:55816(1)
Nomenclature History


GENE EXPRESSION:(current status)
Directly submitted expression data: 4 figure(s) (4 images) from Thisse et al., 2004 [MGC:55816]
Wild Type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Segmentation:14-19 somites (16.00h-19.00h)
  anterior axial hypoblast, hatching gland, polster
Curated microarray expression: GEO  (1)

MUTANTS AND TARGETED KNOCKDOWNS:
Phenotype: (current status)

GENE PRODUCTS:

Gene Ontology
Ontology GO Term
Molecular Function calcium ion binding (more)
Cellular Component membrane
All GO Terms (3)

Protein Families, Domains and Sites:
  • InterPro:IPR001382 (1)
  • Pfam:PF01532 (1)
  • Loading Transcript Data...

    SEGMENT (CLONE AND PROBE) RELATIONSHIPS:
    edem1 Contained in [BAC] DKEY-20F24 (1)    (order this)
    edem1 Encodes [cDNA] MGC:55816 (1)    (order this) , MGC:192795 (1)    (order this)

    SEQUENCE INFORMATION:
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201189 (1) 3352 bp
    Genomic GenBank:BX950172 (1) 231139 bp
    Polypeptide UniProtKB:Q7ZVP7 (1) 524 aa
    Sequence Clusters UniGene:11486 (1)
    All Sequence Information (9)

    OTHER  edem1  GENE / MARKER PAGES:

  • Entrez Gene:394164 (1)
  • VEGA:OTTDARG00000019909 (1)
  • Ensembl(Zv8):ENSDARG00000025094 (1)

  • MAPPING INFORMATION:
      LG:  6    Details

    ORTHOLOGY:
      Evidence
    Species Symbol Chromosome (Position) Accession # AA CL
    Zebrafish edem1  6
    Human EDEM1  3 (p26.1)
  • OMIM:607673
  • Entrez Gene:9695
  • Orthology Details

    CITATIONS   (11)