Gene
celf2
- ID
- ZDB-GENE-030826-35
- Name
- cugbp, Elav-like family member 2
- Symbol
- celf2 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 4 Mapping Details/Browsers
- Description
- Predicted to have mRNA binding activity. Predicted to be involved in mRNA splice site selection and regulation of alternative mRNA splicing, via spliceosome. Predicted to localize to cytoplasm; nucleus; and ribonucleoprotein complex. Is expressed in immature eye; musculature system; nervous system; and neural tube. Orthologous to human CELF2 (CUGBP Elav-like family member 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 10 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb906 (14 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
---|---|---|---|
developmental and epileptic encephalopathy 97 | Alliance | Developmental and epileptic encephalopathy 97 | 619561 |
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR000504 | RNA recognition motif domain |
Domain | IPR034196 | CELF1/2, RNA recognition motif 1 |
Domain | IPR034198 | CELF1/2, RNA recognition motif 2 |
Domain | IPR034199 | CELF1/2, RNA recognition motif 3 |
Family | IPR002343 | Paraneoplastic encephalomyelitis antigen |
Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
Protein | Length | CELF1/2, RNA recognition motif 1 | CELF1/2, RNA recognition motif 2 | CELF1/2, RNA recognition motif 3 | Nucleotide-binding alpha-beta plait domain superfamily | Paraneoplastic encephalomyelitis antigen | RNA-binding domain superfamily | RNA recognition motif domain |
---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M9Q097
|
502 | |||||||
UniProtKB:A0A8M9QB14
|
497 | |||||||
UniProtKB:A0A8M9Q087
|
547 | |||||||
UniProtKB:A0A8M9QB04
|
544 | |||||||
UniProtKB:A0A8M9PH22
|
518 | |||||||
UniProtKB:A0A8M9PU80
|
537 | |||||||
UniProtKB:A0A8M9Q5S6
|
542 | |||||||
UniProtKB:A0A8M9PH27
|
558 | |||||||
UniProtKB:Q6P0B1
|
514 | |||||||
UniProtKB:A0A8M9Q5T1
|
496 | |||||||
UniProtKB:A0A8M9PU91
|
493 | |||||||
UniProtKB:A0A8M9PH20
|
538 | |||||||
UniProtKB:A0A8M9QB19
|
483 | |||||||
UniProtKB:A0A8M9Q0A2
|
492 | |||||||
UniProtKB:A0A8M9PH30
|
544 | |||||||
UniProtKB:A0A8M9PU94
|
477 | |||||||
UniProtKB:A0A8M9Q5S8
|
522 | |||||||
UniProtKB:A0A8M9Q5T3
|
482 | |||||||
UniProtKB:Q4U0V5
|
493 | |||||||
UniProtKB:A0A8M9Q092
|
528 | |||||||
UniProtKB:A0A8M9PU86
|
503 | |||||||
UniProtKB:A0A8M9PH35
|
483 | |||||||
UniProtKB:A0A8M6Z5W1
|
548 | |||||||
UniProtKB:A0A8M9QB09
|
524 | |||||||
UniProtKB:A0A8M9QB24
|
532 | |||||||
UniProtKB:A0A8M9PU99
|
473 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
celf2-201
(1)
|
Ensembl | 1699 nt | |
mRNA |
celf2-202
(1)
|
Ensembl | 1886 nt | |
mRNA |
celf2-203
(1)
|
Ensembl | 1545 nt | |
mRNA |
celf2-204
(1)
|
Havana | 3045 nt | |
mRNA |
celf2-205
(1)
|
Havana | 1538 nt | |
mRNA |
celf2-206
(1)
|
Havana | 1480 nt | |
mRNA |
celf2-207
(1)
|
Havana | 1060 nt | |
mRNA |
celf2-208
(1)
|
Havana | 1480 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Comparative Orthology
- Alliance