ZFIN ID: ZDB-GENE-030131-3777

Gene Name:TAR DNA binding protein
Gene Symbol: tardbp

Previous Names: wu:fc52g10(1) , fc52g10, wu:fb77f02(1) , fb77f02
Nomenclature History

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GENE EXPRESSION:(current status)

All expression data:	4 figure(s) from 2 publications
Directly submitted expression data:	1 figure(s) (1 images) from Thisse et al., 2005 [eu466]
Wild Type Stages, Structures:	Zygote:1-cell (0.00h-0.75h) to Larval:Day 6 (144.00h-168.00h)
	brain, eye ... (all 7)
Curated microarray expression:	GEO  (1)

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MUTANTS AND TARGETED KNOCKDOWNS:

Mutant line(s):   2 genotypes
Allele(s):   fh301, unrec_tardbp

Phenotype: (current status)

Data:	2 figures from Kabashi et al., 2010
Observed in:	locomotory behavior, peripheral motor axons, thigmotaxis

Knockdown reagent: MO1-tardbp (1)

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GENE PRODUCTS:

Gene Ontology

Ontology	GO Term
Biological Process	axon extension (more)
Molecular Function	nucleic acid binding (more)

All GO Terms (4)

Protein Families, Domains and Sites:

InterPro:IPR000504 (1) InterPro:IPR012677 (1)

PROSITE:PS50102 (1)

Pfam:PF00076 (1)

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SEGMENT (CLONE AND PROBE) RELATIONSHIPS:

tardbp Contained in	[BAC] DKEY-148L2 (1)    (order this)
tardbp Encodes	[EST] eu466 (1) , fb77f02 , fc52g10 [cDNA] MGC:55939 (1)    (order this)

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SEQUENCE INFORMATION:

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_201476 (1)	2787 bp	- Select Tool - ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX663614 (1)	191715 bp	- Select Tool - MegaBLAST Ensembl
Polypeptide	UniProtKB:Q802C7 (1)	412 aa	- Select Tool - ZFIN BLAST Ensembl SIB BLAST
Sequence Clusters	UniGene:2409 (1)
All Sequence Information (13)

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OTHER  tardbp  GENE / MARKER PAGES:

Entrez Gene:325052 (1)

VEGA:OTTDARG00000019917 (1)

Ensembl(Zv8):ENSDARG00000040031 (1)

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MAPPING INFORMATION:

LG:  6    Details

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ORTHOLOGY:

				Evidence
Species	Symbol	Chromosome (Position)	Accession #	AA	CL
Zebrafish	tardbp	6
Human	TARDBP	1 (p36.22)	OMIM:605078 Entrez Gene:23435
Mouse	Tardbp	4 (78.77 cM)	MGI:2387629 Entrez Gene:230908
Orthology Details

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CITATIONS   (14)