Research
General Information
ZIRC
ZFIN: Gene: ugdh
ZFIN ID: ZDB-GENE-011022-1

Gene Name:UDP-glucose dehydrogenase
Gene Symbol: ugdh
Previous Names: jekyll, jek, tdsubc_2a8, xx:tdsubc_2a8, ik:tdsubc_2a8(1)
Nomenclature History


GENE EXPRESSION:(current status)
All expression data: 3 figure(s) from 3 publications
Wild Type Stages, Structures: Hatching:Long-pec (48.00h-60.00h) to Larval:Protruding-mouth (72.00h-96.00h, 3.5mm)
  chondrocranium, otic vesicle ... (all 5)
Curated microarray expression: GEO  (1)

MUTANTS AND TARGETED KNOCKDOWNS:
Mutant line(s):   3 genotypes
Allele(s):   m151, m310
Phenotype: (current status)
  Data: 6 figures from 2 publications
  Observed in: cartilage development, head, heart, pectoral fin, pharyngeal arch 3-7 skeleton ... (all 8)

GENE PRODUCTS:

Gene Ontology
Ontology GO Term
Molecular Function NAD or NADH binding (more)
Biological Process metabolic process (more)
All GO Terms (8)

Protein Families, Domains and Sites:
  • InterPro:IPR001732 (1)
  • InterPro:IPR008927 (1)
  • InterPro:IPR013328 (1)
  • InterPro:IPR014026 (1)
  • InterPro:IPR014027 (1)
  • InterPro:IPR014028 (1)
  • InterPro:IPR016040 (1)
  • InterPro:IPR017476 (1)
  • Pfam:PF00984 (1)
  • Pfam:PF03720 (1)
  • Pfam:PF03721 (1)
  • Loading Transcript Data...

    SEGMENT (CLONE AND PROBE) RELATIONSHIPS:
    ugdh Contained in [BAC] DKEY-274K22 (1)    (order this)
    ugdh Encodes [EST] tdsubc_2a8 (1)
    [cDNA] MGC:174854 (1)    (order this) , MGC:194857 (1)    (order this) , MGC:194893 (1)    (order this)

    SEQUENCE INFORMATION:
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001110402 (1) 2247 bp
    Genomic GenBank:CR759875 (1) 216255 bp
    Polypeptide UniProtKB:A8WGP7 (1) 493 aa
    Sequence Clusters UniGene:78436 (1)
    All Sequence Information (16)

    OTHER  ugdh  GENE / MARKER PAGES:

  • Entrez Gene:116991 (1)
  • VEGA:OTTDARG00000021686 (1)
  • Ensembl(Zv8):ENSDARG00000019838 (1)

  • MAPPING INFORMATION:
      LG:  1    Details

    ORTHOLOGY:
      Evidence
    Species Symbol Chromosome (Position) Accession # AA CL
    Zebrafish ugdh  1
    Human UGDH  4 (p15.1)
  • OMIM:603370
  • Entrez Gene:7358
  • Mouse Ugdh  5 (38.00 cM)
  • MGI:1306785
  • Entrez Gene:22235
  • Fruit fly sgl  3L
  • FLYBASE:FBgn0010851
  • Orthology Details

    CITATIONS   (24)