Gene

gpa33a

ID

ZDB-GENE-080229-4

Name

glycoprotein A33 (transmembrane), paralog a

Symbol

gpa33a Nomenclature History

Previous Names

sc:d0144 (1)
si:zfos-1011f11.1 (1)

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to localize to integral component of plasma membrane. Is expressed in several structures, including EVL; digestive system; epidermis; periderm; and sensory system. Orthologous to human GPA33 (glycoprotein A33).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2008

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cssl:d144 (15 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With gpa33a Human Ortholog

No data available

Associated With gpa33a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003598	Immunoglobulin subtype 2
Domain	IPR003599	Immunoglobulin domain subtype
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR013106	Immunoglobulin V-set domain
Family	IPR042474	Cell surface A33 antigen
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Length	Cell surface A33 antigen	Immunoglobulin domain subtype	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	Immunoglobulin subtype 2	Immunoglobulin V-set domain
UniProtKB:A0A0R4IIH3 InterPro	449
UniProtKB:A0A8M9P6M7 InterPro	439
UniProtKB:A0A8M6YXN3 InterPro	493
UniProtKB:Q6NW88 InterPro	442

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	gpa33a-202 (1) Ensembl	Ensembl	2,734 nt	Select Tool ZFIN BLAST
mRNA	gpa33a-203 (1) Ensembl	Ensembl	2,737 nt	Select Tool ZFIN BLAST
mRNA	gpa33a-204 (1) Ensembl	Ensembl	2,069 nt	Select Tool ZFIN BLAST
mRNA	gpa33a-206 (1) Ensembl	Ensembl	887 nt	Select Tool ZFIN BLAST
ncRNA	si:zfos-1011f11.1-003 (1) Ensembl	Ensembl	3,548 nt	Select Tool ZFIN BLAST
ncRNA	si:zfos-1011f11.1-005 (1) Ensembl	Ensembl	751 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations