Gene

asb5b

ID

ZDB-GENE-050417-271

Name

ankyrin repeat and SOCS box containing 5b

Symbol

asb5b Nomenclature History

Previous Names

asb5
zgc:112094

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to be involved in positive regulation of protein catabolic process and protein ubiquitination. Predicted to localize to integral component of membrane. Is expressed in heart; heart rudiment; heart tube; musculature system; and myotome. Orthologous to human ASB5 (ankyrin repeat and SOCS box containing 5).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:112094 (9 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With asb5b Human Ortholog

No data available

Associated With asb5b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001496	SOCS box domain
Domain	IPR037328	Ankyrin repeat and SOCS box protein 5, SOCS box domain
Homologous_superfamily	IPR036036	SOCS box-like domain superfamily
Homologous_superfamily	IPR036770	Ankyrin repeat-containing domain superfamily
Repeat	IPR002110	Ankyrin repeat

Domain Details Per Protein

Protein	Length	Ankyrin repeat	Ankyrin repeat and SOCS box protein 5, SOCS box domain	Ankyrin repeat-containing domain superfamily	SOCS box domain	SOCS box-like domain superfamily
UniProtKB:A0A8M9QAL2 InterPro	269
UniProtKB:A0A8M9QAL0 InterPro	292
UniProtKB:A0A8M2B766 InterPro	305
UniProtKB:A0A8M3ATT9 InterPro	281
UniProtKB:Q561U7 InterPro	328

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	asb5b-201 (1) Ensembl	Havana	1546 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	asb5b-202 (1) Ensembl	Havana	206 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	asb5b-203 (1) Ensembl	Havana	743 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	asb5b-204 (1) Ensembl	Havana	744 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	asb5b-205 (1) Ensembl	Havana	853 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	asb5b-006 (1) Ensembl	Havana	432 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations