ZFIN is now using GRCz12tu for Genomic Data
Gene
slc17a6b
- ID
- ZDB-GENE-030616-554
- Name
- solute carrier family 17 member 6b
- Symbol
- slc17a6b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable transmembrane transporter activity. Acts upstream of or within chemical synaptic transmission and visual perception. Predicted to be located in neuron projection; plasma membrane; and synaptic vesicle. Predicted to be active in excitatory synapse and synaptic vesicle membrane. Is expressed in head; nervous system; and trigeminal placode. Orthologous to human SLC17A6 (solute carrier family 17 member 6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 39 figures from 20 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- eu1082 (18 images)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Major facilitator superfamily | Major facilitator superfamily domain | Major Facilitator Superfamily Sodium/Anion Cotransporter | MFS transporter superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:Q5W8I8 | InterPro | 584 | ||||
| UniProtKB:Q8JFT2 | InterPro | 515 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slc17a6b-201
(1)
|
Ensembl | 1,548 nt | ||
| mRNA |
slc17a6b-202
(1)
|
Ensembl | 5,680 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab1-slc17a6 | polyclonal | Rabbit |
|
1 |
Plasmids
No data available
- Genome Browsers