Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-060929-1042
Gene Name: Rab geranylgeranyltransferase, alpha subunit
Gene Symbol: rabggta
Previous Names: zgc:153107
Nomenclature History
GENE EXPRESSION No data available
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein prenylation (more)
Cellular Component cellular_component (more)
Molecular Function Rab geranylgeranyltransferase activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001611 (1)
  • InterPro:IPR002088 (1)
  • InterPro:IPR008940 (1)
  • InterPro:IPR009087 (1)
  • PROSITE:PS51147 (1)
  • PROSITE:PS51450 (1)
  • Pfam:PF00560 (1)
  • Pfam:PF01239 (1)
  • Pfam:PF07711 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rabggta-001 (1) 2995
    ncRNA rabggta-002 (1) 881
    GENE PRODUCT DESCRIPTION No description available
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM rabggta No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    rabggta Contained in: [BAC] CH73-212E20 (1) (order this)
    rabggta Encodes: [cDNA] MGC:153107 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001076663 (1) 3015 bp
    Genomic GenBank:CU693481 (1) 87009 bp
    Select Tool
    Polypeptide UniProtKB:Q08CG5 (1) 580 aa
    Sequence Clusters UniGene:152023 (1)
    Sequence Information (all 8)
    OTHER rabggta GENE PAGES
  • Gene:767725 (1)
  • VEGA:OTTDARG00000034070 (1)
  • Ensembl(Zv9):ENSDARG00000061024 (1)
  • MAPPING INFORMATION
    Chr: 23 Details
    ORTHOLOGY
      Evidence
    Species Symbol Chromosome (Position) Accession # AA CL
    Zebrafish rabggta 23  
    Human RABGGTA 14 (14q11.2)
  • OMIM:601905
  • Gene:5875
  • Mouse Rabggta 14 (28.19 cM)
  • MGI:1860443
  • Gene:56187
  • CITATIONS (9)