Gene

ddx42

ID
ZDB-GENE-050706-53
Name
DEAD (Asp-Glu-Ala-Asp) box helicase 42
Symbol
ddx42 Nomenclature History
Previous Names
  • im:7148194
  • si:dkey-15n1.10
  • zgc:111815
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to have RNA binding activity and RNA helicase activity. Predicted to localize to nucleus. Orthologous to human DDX42 (DEAD-box helicase 42).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ddx42 Human Ortholog
No data available
Associated With ddx42 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site
Domain IPR001650 Helicase, C-terminal domain-like
Domain IPR011545 DEAD/DEAH box helicase domain
Domain IPR014001 Helicase superfamily 1/2, ATP-binding domain
Domain IPR014014 RNA helicase, DEAD-box type, Q motif
Family IPR050079 DEAD box RNA helicase
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length ATP-dependent RNA helicase DEAD-box, conserved site DEAD box RNA helicase DEAD/DEAH box helicase domain Helicase, C-terminal domain-like Helicase superfamily 1/2, ATP-binding domain P-loop containing nucleoside triphosphate hydrolase RNA helicase, DEAD-box type, Q motif
UniProtKB:F1QSB8 908
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ddx42-201 (1) Ensembl 3,693 nt
ncRNA ddx42-002 (1) Ensembl 577 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations