Gene
cxxc1b
- ID
- ZDB-GENE-030728-4
- Name
- CXXC finger protein 1b
- Symbol
- cxxc1b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Description
- Predicted to have DNA binding activity and zinc ion binding activity. Involved in DNA methylation on cytosine; blood vessel development; and hemopoiesis. Predicted to localize to Set1C/COMPASS complex. Is expressed in retinal cone cell and retinal photoreceptor layer. Orthologous to human CXXC1 (CXXC finger protein 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 6 figures from 4 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55527 (1 image)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR019786 | Zinc finger, PHD-type, conserved site |
| Domain | IPR001965 | Zinc finger, PHD-type |
| Domain | IPR002857 | Zinc finger, CXXC-type |
| Domain | IPR019787 | Zinc finger, PHD-finger |
| Domain | IPR022056 | CpG binding protein, C-terminal |
| Family | IPR037869 | Spp1/CFP1 |
| Homologous_superfamily | IPR011011 | Zinc finger, FYVE/PHD-type |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
Domain Details Per Protein
| Protein | Length | CpG binding protein, C-terminal | Spp1/CFP1 | Zinc finger, CXXC-type | Zinc finger, FYVE/PHD-type | Zinc finger, PHD-finger | Zinc finger, PHD-type | Zinc finger, PHD-type, conserved site | Zinc finger, RING/FYVE/PHD-type |
|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:Q7SZE4
|
563 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
cxxc1b-201
(1)
|
Ensembl | 2,020 nt | ||
| ncRNA |
cxxc1b-002
(1)
|
Ensembl | 497 nt |
Interactions and Pathways
No data available
Plasmids
No data available