ZFIN is now using GRCz12tu for Genomic Data
Gene
kpna3
- ID
- ZDB-GENE-030616-541
- Name
- karyopherin alpha 3 (importin alpha 4)
- Symbol
- kpna3 Nomenclature History
- Previous Names
-
- si:dz79f24.2
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable nuclear import signal receptor activity and nuclear localization sequence binding activity. Predicted to be involved in NLS-bearing protein import into nucleus. Predicted to be located in cytoplasm. Predicted to be part of NLS-dependent protein nuclear import complex. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 88. Orthologous to human KPNA3 (karyopherin subunit alpha 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:63818 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| hereditary spastic paraplegia 88 | Alliance | Spastic paraplegia 88, autosomal dominant | 620106 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR002652 | Importin-alpha, importin-beta-binding domain |
| Family | IPR024931 | Importin subunit alpha |
| Homologous_superfamily | IPR011989 | Armadillo-like helical |
| Homologous_superfamily | IPR016024 | Armadillo-type fold |
| Homologous_superfamily | IPR036975 | Importin-alpha, importin-beta-binding domain superfamily |
| Repeat | IPR000225 | Armadillo |
| Repeat | IPR032413 | Atypical Arm repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Armadillo | Armadillo-like helical | Armadillo-type fold | Atypical Arm repeat | Importin-alpha, importin-beta-binding domain | Importin-alpha, importin-beta-binding domain superfamily | Importin subunit alpha |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q8JFT7 | InterPro | 520 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
kpna3-201
(1)
|
Ensembl | 3,998 nt | ||
| mRNA | ottdart00000001842 (1) | Havana | 1,816 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers