Gene

xbp1

ID
ZDB-GENE-011210-2
Name
X-box binding protein 1
Symbol
xbp1 Nomenclature History
Previous Names
  • cb918 (1)
  • id:ibd1195
  • trebf (1)
  • wu:fb02h05 (1)
  • wu:fb63f10 (1)
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Exhibits DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in gland development; hatching; and transcription by RNA polymerase II. Predicted to localize to integral component of endoplasmic reticulum membrane and nucleus. Is expressed in several structures, including axial mesoderm; axis; digestive system; ectoderm; and germ ring. Orthologous to human XBP1 (X-box binding protein 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
71 figures from 46 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With xbp1 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
{Major affective disorder-7, susceptibility to} 612371
Associated With xbp1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR004827 Basic-leucine zipper domain
Family IPR052470 Endoplasmic Reticulum Stress-Regulated Transcription Factor
Homologous_superfamily IPR046347 Basic-leucine zipper domain superfamily
Domain Details Per Protein
Protein Length Basic-leucine zipper domain Basic-leucine zipper domain superfamily Endoplasmic Reticulum Stress-Regulated Transcription Factor
UniProtKB:Q90X27 263
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript xbp1-202 (1) Ensembl 2,135 nt
mRNA xbp1-201 (1) Ensembl 2,135 nt
mRNA xbp1-203 (1) Ensembl 1,728 nt
ncRNA xbp1-003 (1) Ensembl 813 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations