ZFIN Sequences for Gene: prkaa1

ZFIN ID: ZDB-GENE-030325-1

SEQUENCE INFORMATION

Gene Name:	protein kinase, AMP-activated, alpha 1 catalytic subunit
Gene Symbol:	prkaa1

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001110286 (1)	1939 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01014662 (1)	3563 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK690837 (1)	628 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CB333792 (1)	548 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CB333796 (1)	539 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CB333795 (1)	503 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CB333791 (1)	486 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI331559 (1)	463 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI332250 (1)	418 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:CR382323 (1)	143411 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU019641 (1)	79794 nt	Select Tool MegaBLAST Ensembl
	GenBank:JBMGRA010000005 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A5WUM0 (1)	573 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001103756 (1)	573 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:CAN88774 (1)	573 aa	Select Tool ZFIN BLAST NCBI BLAST

prkaa1 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH73-278C20 (1)	Genomic	GenBank:CU019641	79794	Select Tool MegaBLAST Ensembl
[BAC] DKEY-226M8 (1)	Genomic	GenBank:CR382323	143411	Select Tool MegaBLAST Ensembl

prkaa1 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[EST] cb116 (1)	RNA	GenBank:CB333792	548	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:CB333791	486	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] cb130 (1)	RNA	GenBank:CB333796	539	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:CB333795	503	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fa94c10 (2)	RNA	GenBank:AI331559	463	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI332250	418	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] IMAGE:7154392 (1)	RNA	GenBank:CK690837	628	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT