ZFIN Sequences for Gene: plod3

ZFIN ID: ZDB-GENE-021031-4

ZFIN ID: ZDB-GENE-021031-4

SEQUENCE INFORMATION

Gene Name:	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
Gene Symbol:	plod3

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001044343 (1)	2561 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005162427 (1)	2459 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01030726 (1)	2652 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:DQ019227 (1)	2573 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC133839 (1)	2538 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC163451 (1)	2397 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CF417020 (1)	665 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BU808678 (1)	663 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK675390 (1)	588 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI558423 (1)	541 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BU808679 (1)	521 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI544587 (1)	497 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI544602 (1)	448 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI558405 (1)	399 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX255941 (1)	107132 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU682777 (2)	84833 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX510651 (2)	74936 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU682622 (2)	67134 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX293534 (1)	37346 nt	Select Tool MegaBLAST Ensembl
	GenBank:JBMGRA010000023 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A3KNH4 (2)	730 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M2B9A3 (1)	686 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001037808 (1)	730 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005162484 (1)	686 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAI33840 (1)		Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI63451 (1)		Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAY84150 (1)		Select Tool ZFIN BLAST NCBI BLAST

plod3 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH73-269M23 (1)	Genomic	GenBank:CU682777	84833	Select Tool MegaBLAST Ensembl
[BAC] CH73-361H17 (1)	Genomic	GenBank:CU682622	67134	Select Tool MegaBLAST Ensembl
[BAC] DKEY-232A10 (1)	Genomic	GenBank:BX510651	74936	Select Tool MegaBLAST Ensembl
[PAC] BUSM1-182C22 (2)	Genomic	GenBank:BX255941	107132	Select Tool MegaBLAST Ensembl

plod3 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:162023 (1)	RNA	GenBank:BC133839	2538	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[CDNA] MGC:194964 (1)	RNA	GenBank:BC163451	2397	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] cb479 (1)	RNA	GenBank:BU808678	663	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BU808679	521	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] cb816 (1)	RNA	GenBank:CF417020	665	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fb72f10 (1)	RNA	GenBank:AI544587	497	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI558405	399	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fb72h05	RNA	GenBank:AI558423	541	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI544602	448	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] IMAGE:6912725 (1)	RNA	GenBank:CK675390	588	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT