ZFIN Sequences for Gene: CH73-29L19

ZFIN ID: ZDB-BAC-111024-122

ZFIN ID: ZDB-BAC-111024-122

SEQUENCE INFORMATION

BAC Name:	CH73-29L19

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_200313 (1)	4389 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001020617 (1)	1947 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001013288 (1)	927 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_002662486 (1)	3083 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_001923825 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	GenBank:GFIL01003874 (1)	4427 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC050498 (1)	4389 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01017975 (1)	3126 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC095347 (1)	1947 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01022203 (1)	1884 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK864466 (1)	951 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC090293 (1)	930 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01044423 (1)	930 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC129290 (1)	876 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01012858 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:BX004839 (2)	223000 nt	Blast at MegaBLAST
	GenBank:CU915768	136965 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR548641 (2)	112183 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:Q7ZU90 (1)	1026 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:X1WEU6 (1)	436 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:Q503F7 (1)	277 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A0R4IJB6 (1)	208 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:Q5EAQ9 (1)	166 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_956607 (1)	1026 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001013306 (1)	166 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001018453 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_001923860 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_002662532 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH50498 (1)	1026 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:Q7ZU90 (1)	1026 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH95347 (1)	277 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH90293 (1)	166 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI29291 (1)	166 aa	Select Tool ZFIN BLAST NCBI BLAST

CH73-29L19 CONTAINS

Marker	Type	Accession #	Length (nt/aa)	Analysis
[GENE] chd1l (13)	RNA	RefSeq:NM_200313	4389	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01003874	4427	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC050498	4389	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:BX004839	223000	Blast at MegaBLAST
	Genomic	GenBank:CU915768	136965	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CR548641	112183	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:Q7ZU90	1026	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_956607	1026	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:Q7ZU90	1026	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAH50498	1026	Select Tool ZFIN BLAST NCBI BLAST
[GENE] sft2d2a (10)	RNA	RefSeq:NM_001013288	927	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01044423	930	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC090293	930	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC129290	876	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:BX004839	223000	Blast at MegaBLAST
	Genomic	GenBank:CU915768	136965	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:Q5EAQ9	166	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001013306	166	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAI29291	166	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAH90293	166	Select Tool ZFIN BLAST NCBI BLAST
[GENE] si:ch73-29l19.1 (1)	RNA	RefSeq:XM_001923825		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQH01012858		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	Genomic	GenBank:CU915768	136965	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A0A0R4IJB6	208	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_001923860		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
[GENE] tmem45a (10)	RNA	RefSeq:NM_001020617	1947	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC095347	1947	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQH01022203	1884	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:BX004839	223000	Blast at MegaBLAST
	Genomic	GenBank:CU915768	136965	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:Q503F7	277	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001018453		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAH95347	277	Select Tool ZFIN BLAST NCBI BLAST
[GENE] traf3ip2l (5)	RNA	RefSeq:XM_002662486	3083	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01017975	3126	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:CK864466	951	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:CU915768	136965	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CR548641	112183	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:X1WEU6	436	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_002662532		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast