ZFIN ID: ZDB-GENE-040426-892
Gene Name: chromodomain helicase DNA binding protein 1-like
Gene Symbol: chd1l
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:56084 (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56084]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7141250]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH chd1l HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH chd1l VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular response to DNA damage stimulus (more)
Cellular Component nucleus (more)
Molecular Function ATPase activity (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000330 (1)
  • InterPro:IPR001357 (1)
  • InterPro:IPR001650 (1)
  • InterPro:IPR002589 (1)
  • InterPro:IPR014001 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR031053 (1)
  • InterPro:IPR031916 (1)
  • InterPro:IPR036420 (1)
  • InterPro:IPR038718 (1)
  • PROSITE:PS50172 (1)
  • PROSITE:PS51154 (1)
  • PROSITE:PS51192 (1)
  • PROSITE:PS51194 (1)
  • Pfam:PF00176 (1)
  • Pfam:PF00271 (1)
  • Pfam:PF16759 (1)
  • EC:3.6.4.12 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ottdart00000061850 (1) 4437
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM chd1l No data available
    MARKER RELATIONSHIPS
    chd1lContained in: [BAC] CH73-29L19 (1) (order this), CH211-255N14 (1) (order this)
    chd1lEncodes: [EST] IMAGE:7141250 (1) (order this)
    [cDNA] MGC:56084 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200313 (1) 4389bp
    Genomic GenBank:CU915768 (1) 136965bp
    Select Tool
    Polypeptide UniProtKB:F1R485 (1) 1026aa
    Sequence Clusters UniGene:84280 (1)
    Sequence Information (all 14)
    OTHER chd1l GENE PAGES
  • Alliance (1)
  • Gene:393283 (1)
  • VEGA:OTTDARG00000042801 (1)
  • Ensembl(GRCz11):ENSDARG00000015471 (2)
  • ORTHOLOGY for chd1l (Chr: 6)
    CITATIONS (21)