ZFIN ID: ZDB-GENE-050227-13
Gene Name: SFT2 domain containing 2a
Gene Symbol: sft2d2a    Nomenclature History

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Previous Names: im:7144035, zgc:110788 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to be involved in protein transport and vesicle-mediated transport. Predicted to localize to integral component of membrane. Orthologous to human SFT2D2 (SFT2 domain containing 2).
Genome Resources: Alliance (1),  Gene:503601 (1),  Ensembl(GRCz11):ENSDARG00000070746 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110788]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13673 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40735 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sft2d2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sft2d2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA sft2d2a-201 (1)    Ensembl 905
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sft2d2a No data available
    MARKER RELATIONSHIPS
    sft2d2a Contained in: [BAC] CH73-29L19 (1), DKEY-18A23 (1) (order this)
    sft2d2a Encodes: [EST] IMAGE:7144035 (1)
    [cDNA] MGC:110788 (1), MGC:158554 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001013288 (1) 930 nt
    Genomic GenBank:BX004839 (1) 223000 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8QBC1 (1) 167 aa
    Sequence Information (all 15)
    ORTHOLOGY for sft2d2a ( Chr: 6 )
    CITATIONS (18)