header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-050227-13
Gene Name: SFT2 domain containing 2a
Gene Symbol: sft2d2a
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: im:7144035, zgc:110788 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in protein transport and vesicle-mediated transport. Predicted to localize to the integral component of membrane. Orthologous to human SFT2D2 (SFT2 domain containing 2).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110788]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13673 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40735 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sft2d2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sft2d2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007305 (1)
  • InterPro:IPR011691 (1)
  • Pfam:PF04178 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sft2d2a-201 (1) 905
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sft2d2a No data available
    MARKER RELATIONSHIPS
    sft2d2aContained in: [BAC] CH73-29L19 (1) (order this), DKEY-18A23 (1) (order this)
    sft2d2aEncodes: [EST] IMAGE:7144035 (1) (order this)
    [cDNA] MGC:110788 (1) (order this), MGC:158554 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001013288 (1) 930bp
    Genomic GenBank:BX004839 (1) 223000bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8QBC1 (1) 167aa
    Sequence Clusters UniGene:83494 (1)
    Sequence Information (all 16)
    ORTHOLOGY for sft2d2a (Chr: 6)
    CITATIONS (16)