ZFIN ID: ZDB-BAC-050218-1679
SEQUENCE INFORMATION
BAC Name: CH211-141O9
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_198908 (1) 3491 nt
RefSeq:NM_131400 (1) 2750 nt
RefSeq:NM_212632 (1) 2073 nt
RefSeq:NM_001324527 (1) 2040 nt
RefSeq:NM_001003838 (1) 596 nt
RefSeq:NM_173266 (1) 492 nt
RefSeq:XM_021480466 (1) 7659 nt
RefSeq:XM_021474236 (1) 7640 nt
RefSeq:XM_021480297 (1) 6372 nt
RefSeq:XM_680874 (1) 6371 nt
RefSeq:XM_021480115 (1) 3111 nt
RefSeq:XM_001345321 (1) 2850 nt
RefSeq:XM_005156135 (1) 2786 nt
RefSeq:XM_005156136 (1) 2539 nt
RefSeq:XM_021474252 (1) 2360 nt
RefSeq:XM_005156182 (1) 2260 nt
RefSeq:XM_021480298 (1) 2260 nt
RefSeq:XM_009306701 (1)
RefSeq:XM_021474249 (1)
RefSeq:XM_681387 (1)
GenBank:GDQH01000316 (1) 8346 nt
GenBank:GDQQ01003294 (1) 4299 nt
GenBank:GDQH01002666 (1) 3735 nt
GenBank:GDQH01004988 (1) 3625 nt
GenBank:BC058049 (1) 3491 nt
GenBank:BC078287 (1) 2780 nt
GenBank:U43671 (1) 2750 nt
GenBank:GFIL01022635 (1) 2353 nt
GenBank:GDQH01007150 (1) 2043 nt
GenBank:BC052972 (1) 1880 nt
GenBank:BC153633 (1) 1645 nt
GenBank:GDQQ01028332 (1) 1585 nt
GenBank:GFIL01003180 (1) 1578 nt
GenBank:U96848 (1) 1459 nt
GenBank:GDQQ01021950 (1) 1318 nt
GenBank:CD756186 (1) 886 nt
GenBank:DV594166 (1) 877 nt
GenBank:EH586204 (1) 873 nt
GenBank:CT669524 (1) 798 nt
GenBank:DR724330 (1) 781 nt
GenBank:DT070765 (1) 773 nt
GenBank:BC171621 (1) 643 nt
GenBank:AF393213 (1) 596 nt
GenBank:BC046093 (1) 537 nt
GenBank:AI641779 (1) 533 nt
GenBank:AI657859 (1) 524 nt
GenBank:AA497158 (1) 520 nt
GenBank:AI353163 (1) 500 nt
GenBank:AY099533 (1) 492 nt
GenBank:AA495233 (1) 463 nt
GenBank:GFIL01030203 (1) 344 nt
GenBank:AI522441 (1) 342 nt
GenBank:CK738757 (1) 275 nt
GenBank:GDQH01022487 (1)
Genomic GenBank:BX649366 (1) 222310 nt Blast at MegaBLAST
GenBank:BX323878 (1) 190541 nt
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GenBank:BX000473 180366 nt
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GenBank:CR352235 (1) 83709 nt
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GenBank:CU462845 (2) 79308 nt
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GenBank:CT030711 (2) 6705 nt
Polypeptide UniProtKB:A0A8M9QJF1 (1) 2006 aa
UniProtKB:A0A8M9Q4Q9 (1) 2000 aa
UniProtKB:A0A8N7USV6 (1) 904 aa
UniProtKB:E7F4T4 (1) 904 aa
UniProtKB:Q6PEI6 (1) 782 aa
UniProtKB:E7FFF8 (1) 670 aa
UniProtKB:A0A8M9PFG1 (1) 600 aa
UniProtKB:E7F4T7 (1) 453 aa
UniProtKB:A0A8M3B7H0 (1) 369 aa
UniProtKB:A0A8M2B274 (1) 351 aa
UniProtKB:E7F913 (1) 351 aa
UniProtKB:A0A8M9PYE8 (1) 333 aa
UniProtKB:A0A8M2B278 (1) 306 aa
UniProtKB:Q9W722 (1) 300 aa
UniProtKB:E7FBZ9 (1) 296 aa
UniProtKB:O57673 (1) 293 aa
UniProtKB:Q7SZD2 (1) 158 aa
UniProtKB:Q8JI29 (1) 125 aa
UniProtKB:Q6YMR2 (1) 110 aa
RefSeq:NP_001003838 (1)
RefSeq:NP_001311456 (1)
RefSeq:NP_571475 (1)
RefSeq:NP_775373 (1)
RefSeq:NP_944590 (1)
RefSeq:NP_997797 (1)
RefSeq:XP_001345357 (1) 670 aa
RefSeq:XP_005156239 (1) 351 aa
RefSeq:XP_686479 (1) 296 aa
RefSeq:XP_005156192 (1)
RefSeq:XP_005156193 (1)
RefSeq:XP_009304976 (1)
RefSeq:XP_021329911 (1)
RefSeq:XP_021329924 (1)
RefSeq:XP_021329927 (1)
RefSeq:XP_021335790 (1)
RefSeq:XP_021335972 (1)
RefSeq:XP_021335973 (1)
RefSeq:XP_021336141 (1)
RefSeq:XP_685966 (1)
GenPept:AAH58049 (1) 782 aa
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GenPept:AAC00206 (1) 300 aa
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GenPept:AAH78287 (1) 300 aa
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GenPept:AAC00211 (1) 293 aa
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GenPept:AAH52972 (1) 158 aa
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GenPept:AAI53634 (1) 158 aa
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GenPept:AAI71621 (1) 125 aa
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GenPept:AAM73681 (1) 125 aa
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GenPept:AAH46093 (1) 110 aa
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GenPept:AAM28221 (1) 110 aa
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CH211-141O9 CONTAINS
Marker Type Accession # Length (nt/aa) Analysis
[GENE] aco2 (22) RNA RefSeq:NM_198908 3491
  RNA GenBank:GDQH01004988 3625
  RNA GenBank:BC058049 3491
  Genomic GenBank:BX000473 180366
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  Genomic GenBank:CR352235 83709
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  Genomic GenBank:CU462845 79308
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  Polypeptide UniProtKB:Q6PEI6 782
  Polypeptide RefSeq:NP_944590
  Polypeptide GenPept:AAH58049 782
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[GENE] cby1 (8) RNA RefSeq:NM_001003838 596
  RNA GenBank:GFIL01003180 1578
  RNA GenBank:BC171621 643
  RNA GenBank:AF393213 596
  Genomic GenBank:BX323878 190541
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  Genomic GenBank:BX000473 180366
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  Polypeptide UniProtKB:Q8JI29 125
  Polypeptide RefSeq:NP_001003838
  Polypeptide GenPept:AAM73681 125
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  Polypeptide GenPept:AAI71621 125
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[GENE] cdc42ep1a (8) RNA RefSeq:XM_021480298 2260
  RNA RefSeq:XM_005156182 2260
  RNA GenBank:GFIL01022635 2353
  RNA GenBank:DT070765 773
  Genomic GenBank:BX323878 190541
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  Genomic GenBank:BX000473 180366
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  Polypeptide UniProtKB:E7F913 351
  Polypeptide UniProtKB:A0A8M2B274 351
  Polypeptide RefSeq:XP_021335973
  Polypeptide RefSeq:XP_005156239 351
[GENE] pdap1a (6) RNA RefSeq:NM_212632 2073
  RNA GenBank:GDQH01007150 2043
  RNA GenBank:BC052972 1880
  RNA GenBank:BC153633 1645
  RNA GenBank:EH586204 873
  RNA GenBank:CK738757 275
  Genomic GenBank:BX323878 190541
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  Genomic GenBank:BX000473 180366
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  Polypeptide UniProtKB:Q7SZD2 158
  Polypeptide RefSeq:NP_997797
  Polypeptide GenPept:AAI53634 158
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  Polypeptide GenPept:AAH52972 158
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[GENE] phf5a (10) RNA RefSeq:NM_173266 492
  RNA GenBank:BC046093 537
  RNA GenBank:AY099533 492
  RNA GenBank:GFIL01030203 344
  Genomic GenBank:BX323878 190541
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  Genomic GenBank:BX000473 180366
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  Genomic GenBank:CR352235 83709
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  Polypeptide UniProtKB:Q6YMR2 110
  Polypeptide RefSeq:NP_775373
  Polypeptide GenPept:AAM28221 110
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  Polypeptide GenPept:AAH46093 110
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[GENE] sh3bp1 (6) RNA RefSeq:XM_001345321 2850
  RNA RefSeq:XM_021474252 2360
  RNA GenBank:GDQH01002666 3735
  RNA GenBank:DR724330 781
  Genomic GenBank:BX323878 190541
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  Genomic GenBank:BX000473 180366
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  Polypeptide UniProtKB:E7FFF8 670
  Polypeptide UniProtKB:A0A8M9PFG1 600
  Polypeptide RefSeq:XP_021329927
  Polypeptide RefSeq:XP_001345357 670
[GENE] si:ch211-141o9.10 (5) RNA RefSeq:XM_681387
  RNA RefSeq:XM_021474249
  RNA RefSeq:XM_009306701
  RNA GenBank:GDQH01022487
  Genomic GenBank:BX323878 190541
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  Genomic GenBank:BX000473 180366
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  Polypeptide UniProtKB:A0A8M3B7H0 369
  Polypeptide UniProtKB:A0A8M9PYE8 333
  Polypeptide UniProtKB:E7FBZ9 296
  Polypeptide RefSeq:XP_686479 296
  Polypeptide RefSeq:XP_021329924
  Polypeptide RefSeq:XP_009304976
[GENE] slc16a8 (8) RNA RefSeq:XM_021480115 3111
  RNA RefSeq:NM_001324527 2040
  RNA GenBank:GDQQ01028332 1585
  RNA GenBank:DV594166 877
  Genomic GenBank:BX323878 190541
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  Genomic GenBank:BX000473 180366
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  Polypeptide UniProtKB:E7F4T7 453
  Polypeptide RefSeq:XP_021335790
  Polypeptide RefSeq:NP_001311456
[GENE] tefa (24) RNA RefSeq:XM_005156135 2786
  RNA RefSeq:NM_131400 2750
  RNA RefSeq:XM_005156136 2539
  RNA GenBank:GDQQ01003294 4299
  RNA GenBank:BC078287 2780
  RNA GenBank:U43671 2750
  RNA GenBank:U96848 1459
  Genomic GenBank:BX323878 190541
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  Genomic GenBank:BX000473 180366
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  Polypeptide UniProtKB:A0A8M2B278 306
  Polypeptide UniProtKB:Q9W722 300
  Polypeptide UniProtKB:O57673 293
  Polypeptide RefSeq:XP_005156193
  Polypeptide RefSeq:XP_005156192
  Polypeptide RefSeq:NP_571475
  Polypeptide GenPept:AAH78287 300
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  Polypeptide GenPept:AAC00206 300
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  Polypeptide GenPept:AAC00211 293
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[GENE] tnrc6ba (12) RNA RefSeq:XM_021480466 7659
  RNA RefSeq:XM_021474236 7640
  RNA GenBank:GDQH01000316 8346
  RNA GenBank:CD756186 886
  RNA GenBank:AI641779 533
  RNA GenBank:AI657859 524
  RNA GenBank:AA497158 520
  RNA GenBank:AI353163 500
  RNA GenBank:AA495233 463
  RNA GenBank:AI522441 342
  Genomic GenBank:BX649366 222310 Blast at MegaBLAST
  Genomic GenBank:BX323878 190541
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  Genomic GenBank:BX000473 180366
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  Genomic GenBank:CT030711 6705
  Polypeptide UniProtKB:A0A8M9QJF1 2006
  Polypeptide UniProtKB:A0A8M9Q4Q9 2000
  Polypeptide RefSeq:XP_021336141
  Polypeptide RefSeq:XP_021329911
[GENE] zc3h7bb (9) RNA RefSeq:XM_021480297 6372
  RNA RefSeq:XM_680874 6371
  RNA GenBank:GDQQ01021950 1318
  RNA GenBank:CT669524 798
  Genomic GenBank:BX323878 190541
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  Genomic GenBank:BX000473 180366
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  Polypeptide UniProtKB:E7F4T4 904
  Polypeptide UniProtKB:A0A8N7USV6 904
  Polypeptide RefSeq:XP_685966
  Polypeptide RefSeq:XP_021335972