| ZFIN ID: ZDB-BAC-050218-1634 |
| SEQUENCE INFORMATION |
| BAC Name: | CH211-213O11 |
|---|
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_200667 (1) | 4664 nt |
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| RefSeq:NM_213230 (1) | 3247 nt |
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| RefSeq:NM_001287547 (1) | 2664 nt |
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| RefSeq:NM_001045285 (1) | 2236 nt |
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| RefSeq:NM_001082795 (1) | 1865 nt |
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| RefSeq:NM_001118895 (1) | 1761 nt |
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| RefSeq:NM_001004590 (1) | 1410 nt |
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| RefSeq:NM_001114568 (1) | 1226 nt |
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| RefSeq:NM_205708 (1) | 1104 nt |
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| RefSeq:XM_005172915 (1) | 4750 nt |
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| RefSeq:XM_694726 (1) | 4747 nt |
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| RefSeq:XM_005172902 (1) | 4713 nt |
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| RefSeq:XM_005172912 (1) | 3756 nt |
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| RefSeq:XM_005172913 (1) | 3753 nt |
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| RefSeq:XM_005172914 (1) | 3705 nt |
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| RefSeq:XM_005172906 (1) | 2723 nt |
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| RefSeq:XM_005172905 (1) | 2555 nt |
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| RefSeq:XM_009306188 (1) | 1934 nt |
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| RefSeq:XM_005172907 (1) | 1931 nt |
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| RefSeq:XM_009306192 (1) | 1898 nt |
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| RefSeq:XM_005172901 (1) | 1762 nt |
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| RefSeq:XM_021472500 (1) | 1595 nt |
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| RefSeq:XM_009306191 (1) | 1418 nt |
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| RefSeq:XM_017358408 (1) |
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| RefSeq:XM_021479881 (1) |
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| GenBank:GDQH01005904 (1) | 5335 nt |
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| GenBank:GFIL01039273 (1) | 4910 nt |
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| GenBank:GDQH01000710 (1) | 4356 nt |
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| GenBank:GFIL01012017 (1) | 4192 nt |
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| GenBank:BC058043 (1) | 3920 nt |
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| GenBank:BC068433 (1) | 3277 nt |
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| GenBank:KF234084 (1) | 2664 nt |
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| GenBank:GDQH01013372 (1) | 2535 nt |
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| GenBank:BC044419 (1) | 2525 nt |
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| GenBank:BC056808 (1) | 2465 nt |
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| GenBank:BC116583 (1) | 2236 nt |
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| GenBank:BC133845 (1) | 1865 nt |
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| GenBank:GDQH01010472 (1) | 1808 nt |
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| GenBank:BC044361 (1) | 1629 nt |
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| GenBank:GFIL01028217 (1) | 1566 nt |
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| GenBank:BC081611 (1) | 1410 nt |
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| GenBank:BC154626 (1) | 1226 nt |
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| GenBank:GFIL01007776 (1) | 1158 nt |
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| GenBank:AY398400 (1) | 1104 nt |
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| GenBank:BC071495 (1) | 1102 nt |
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| GenBank:BC115102 (1) | 970 nt |
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| GenBank:EH441250 (1) | 950 nt |
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| GenBank:BC095112 (1) | 945 nt |
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| GenBank:BC121725 (1) | 945 nt |
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| GenBank:GFIL01031594 (1) | 849 nt |
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| GenBank:CK680595 (1) | 767 nt |
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| GenBank:GDQQ01037192 (1) | 700 nt |
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| GenBank:BM958377 (1) | 662 nt |
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| GenBank:EB930492 (1) | 648 nt |
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| GenBank:AI496965 (1) | 548 nt |
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| GenBank:AL918604 (1) | 522 nt |
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| Genomic | RefSeq:NW_018394825 (1) | 380476 nt | Blast at MegaBLAST |
| GenBank:BX248230 | 217432 nt | Blast at MegaBLAST | |
| GenBank:BX465223 (1) | 183229 nt | ||
| GenBank:CR933559 (1) | 119833 nt | ||
| GenBank:CU928222 (1) | 109067 nt | ||
| GenBank:BX323554 (2) | 48915 nt | ||
| GenBank:HB870845 (1) | 1104 nt |
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| GenBank:HC928254 (1) | 1104 nt |
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| Polypeptide | UniProtKB:A0A8M2BKP8 (1) | 1061 aa |
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| UniProtKB:E7F660 (1) | 1060 aa |
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| UniProtKB:E7F7E9 (1) | 874 aa |
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| UniProtKB:A0A0R4IEP6 (1) | 815 aa |
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| UniProtKB:Q6NUT7 (1) | 814 aa |
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| UniProtKB:A0A8M2BK86 (1) | 723 aa |
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| UniProtKB:A0A8M2BK44 (1) | 656 aa |
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| UniProtKB:Q1JPV4 (1) | 624 aa |
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| UniProtKB:A0A2R8RL46 (1) | 471 aa |
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| UniProtKB:F1R3Q7 (1) | 468 aa |
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| UniProtKB:A0A8M6Z3F6 (1) | 437 aa |
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| UniProtKB:F1QB79 (1) | 437 aa |
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| UniProtKB:A0A8M3B723 (1) | 346 aa |
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| UniProtKB:A0A8M2BKP2 (1) | 345 aa |
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| UniProtKB:E9QGB7 (1) | 345 aa |
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| UniProtKB:A0A8M3AXW0 (1) | 334 aa |
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| UniProtKB:A3KNH7 (1) | 321 aa |
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| UniProtKB:Q6TGV6 (1) | 241 aa |
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| UniProtKB:Q66HZ6 (1) | 238 aa |
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| UniProtKB:F1Q7F9 (1) | 235 aa |
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| UniProtKB:A0A8M9Q3U6 (1) | 212 aa |
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| UniProtKB:A8WG94 (1) | 181 aa |
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| RefSeq:NP_001274476 (1) | 874 aa |
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| RefSeq:NP_998395 (1) | 814 aa |
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| RefSeq:NP_001004590 (1) |
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| RefSeq:NP_001038750 (1) |
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| RefSeq:NP_001076264 (1) |
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| RefSeq:NP_001108040 (1) |
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| RefSeq:NP_001112367 (1) |
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| RefSeq:NP_956961 (1) |
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| RefSeq:NP_991271 (1) |
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| RefSeq:XP_005172969 (1) | 874 aa |
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| RefSeq:XP_005172970 (1) | 874 aa |
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| RefSeq:XP_005172971 (1) | 874 aa |
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| RefSeq:XP_005172958 (1) |
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| RefSeq:XP_005172959 (1) |
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| RefSeq:XP_005172962 (1) |
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| RefSeq:XP_005172963 (1) |
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| RefSeq:XP_005172964 (1) |
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| RefSeq:XP_005172972 (1) |
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| RefSeq:XP_009304463 (1) |
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| RefSeq:XP_009304466 (1) |
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| RefSeq:XP_009304467 (1) |
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| RefSeq:XP_021328175 (1) |
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| RefSeq:XP_699818 (1) |
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| GenPept:AGW27133 (1) | 874 aa |
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| GenPept:AAH68433 (1) | 814 aa |
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| GenPept:Q6NUT7 (1) | 814 aa |
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| GenPept:AAI16584 (1) | 624 aa |
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| GenPept:AAH44361 (1) | 489 aa |
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| GenPept:AAI33846 (1) | 321 aa |
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| GenPept:AAI15103 (1) | 295 aa |
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| GenPept:AAH95112 (1) | 265 aa |
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| GenPept:AAI21726 (1) | 265 aa |
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| GenPept:AAH71495 (1) | 241 aa |
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| GenPept:AAQ97833 (1) | 241 aa |
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| GenPept:CBF59541 (1) | 241 aa |
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| GenPept:CBU84785 (1) | 241 aa |
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| GenPept:AAH81611 (1) | 238 aa |
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| GenPept:AAH58043 (1) | 235 aa |
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| GenPept:AAI54627 (1) | 181 aa |
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CH211-213O11 CONTAINS
| Marker | Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| [GENE] atxn7l2a (6) | RNA | RefSeq:XM_005172906 | 2723 |
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| RNA | RefSeq:XM_005172905 | 2555 |
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| RNA | RefSeq:NM_001045285 | 2236 |
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| RNA | GenBank:GDQH01013372 | 2535 |
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| RNA | GenBank:BC056808 | 2465 |
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| RNA | GenBank:BC116583 | 2236 |
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| Genomic | GenBank:BX248230 | 217432 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:A0A8M2BK86 | 723 |
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| Polypeptide | UniProtKB:A0A8M2BK44 | 656 |
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| Polypeptide | UniProtKB:Q1JPV4 | 624 |
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| Polypeptide | RefSeq:XP_005172963 |
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| Polypeptide | RefSeq:XP_005172962 |
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| Polypeptide | RefSeq:NP_001038750 |
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| Polypeptide | GenPept:AAI16584 | 624 |
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| [GENE] cav4a (9) | RNA | RefSeq:NM_001114568 | 1226 |
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| RNA | GenBank:BC154626 | 1226 |
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| RNA | GenBank:GDQQ01037192 | 700 |
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| Genomic | RefSeq:NW_018394825 | 380476 | Blast at MegaBLAST | |
| Genomic | GenBank:BX248230 | 217432 | Blast at MegaBLAST | |
| Genomic | GenBank:BX465223 | 183229 | ||
| Polypeptide | UniProtKB:A8WG94 | 181 |
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| Polypeptide | RefSeq:NP_001108040 |
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| Polypeptide | GenPept:AAI54627 | 181 |
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| [GENE] cyb561d1 (4) | RNA | RefSeq:NM_001004590 | 1410 |
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| RNA | GenBank:BC081611 | 1410 |
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| RNA | GenBank:GFIL01007776 | 1158 |
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| Genomic | GenBank:BX248230 | 217432 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:Q66HZ6 | 238 |
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| Polypeptide | RefSeq:NP_001004590 |
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| Polypeptide | GenPept:AAH81611 | 238 |
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| [GENE] grm2b (10) | RNA | RefSeq:XM_005172912 | 3756 |
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| RNA | RefSeq:XM_005172913 | 3753 |
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| RNA | RefSeq:XM_005172914 | 3705 |
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| RNA | RefSeq:NM_001287547 | 2664 |
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| RNA | GenBank:GFIL01012017 | 4192 |
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| RNA | GenBank:KF234084 | 2664 |
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| RNA | GenBank:AL918604 | 522 |
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| Genomic | GenBank:BX248230 | 217432 | Blast at MegaBLAST | |
| Genomic | GenBank:BX465223 | 183229 | ||
| Genomic | GenBank:CR933559 | 119833 | ||
| Genomic | GenBank:BX323554 | 48915 | ||
| Polypeptide | UniProtKB:E7F7E9 | 874 |
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| Polypeptide | RefSeq:XP_005172971 | 874 |
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| Polypeptide | RefSeq:XP_005172970 | 874 |
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| Polypeptide | RefSeq:XP_005172969 | 874 |
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| Polypeptide | RefSeq:NP_001274476 | 874 |
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| Polypeptide | GenPept:AGW27133 | 874 |
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| [GENE] nfya (10) | RNA | RefSeq:XM_009306188 | 1934 |
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| RNA | RefSeq:XM_005172907 | 1931 |
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| RNA | RefSeq:XM_009306192 | 1898 |
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| RNA | RefSeq:NM_001082795 | 1865 |
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| RNA | RefSeq:XM_009306191 | 1418 |
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| RNA | GenBank:BC133845 | 1865 |
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| RNA | GenBank:GFIL01028217 | 1566 |
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| RNA | GenBank:BC115102 | 970 |
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| RNA | GenBank:BC121725 | 945 |
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| RNA | GenBank:BC095112 | 945 |
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| RNA | GenBank:AI496965 | 548 |
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| Genomic | GenBank:BX248230 | 217432 | Blast at MegaBLAST | |
| Genomic | GenBank:BX465223 | 183229 | ||
| Polypeptide | UniProtKB:A0A8M3B723 | 346 |
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| Polypeptide | UniProtKB:E9QGB7 | 345 |
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| Polypeptide | UniProtKB:A0A8M2BKP2 | 345 |
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| Polypeptide | UniProtKB:A0A8M3AXW0 | 334 |
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| Polypeptide | UniProtKB:A3KNH7 | 321 |
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| Polypeptide | RefSeq:XP_009304467 |
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| Polypeptide | RefSeq:XP_009304466 |
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| Polypeptide | RefSeq:XP_009304463 |
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| Polypeptide | RefSeq:XP_005172964 |
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| Polypeptide | RefSeq:NP_001076264 |
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| Polypeptide | GenPept:AAI33846 | 321 |
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| Polypeptide | GenPept:AAI15103 | 295 |
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| Polypeptide | GenPept:AAI21726 | 265 |
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| Polypeptide | GenPept:AAH95112 | 265 |
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| [GENE] psma5 (19) | RNA | RefSeq:NM_205708 | 1104 |
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| RNA | GenBank:AY398400 | 1104 |
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| RNA | GenBank:BC071495 | 1102 |
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| RNA | GenBank:GFIL01031594 | 849 |
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| Genomic | GenBank:BX248230 | 217432 | Blast at MegaBLAST | |
| Genomic | GenBank:HC928254 | 1104 |
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| Genomic | GenBank:HB870845 | 1104 |
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| Polypeptide | UniProtKB:Q6TGV6 | 241 |
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| Polypeptide | RefSeq:NP_991271 |
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| Polypeptide | GenPept:CBU84785 | 241 |
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| Polypeptide | GenPept:CBF59541 | 241 |
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| Polypeptide | GenPept:AAQ97833 | 241 |
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| Polypeptide | GenPept:AAH71495 | 241 |
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| [GENE] rrp9 (7) | RNA | RefSeq:XM_005172901 | 1762 |
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| RNA | RefSeq:NM_001118895 | 1761 |
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| RNA | GenBank:GDQH01010472 | 1808 |
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| RNA | GenBank:BC044361 | 1629 |
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| Genomic | GenBank:BX248230 | 217432 | Blast at MegaBLAST | |
| Genomic | GenBank:BX465223 | 183229 | ||
| Polypeptide | UniProtKB:A0A2R8RL46 | 471 |
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| Polypeptide | UniProtKB:F1R3Q7 | 468 |
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| Polypeptide | RefSeq:XP_005172958 |
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| Polypeptide | RefSeq:NP_001112367 |
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| Polypeptide | GenPept:AAH44361 | 489 |
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| [GENE] si:ch211-213o11.11 (2) | RNA | RefSeq:XM_021479881 |
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| RNA | RefSeq:XM_017358408 |
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| Polypeptide | UniProtKB:F1QB79 | 437 |
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| Polypeptide | UniProtKB:A0A8M6Z3F6 | 437 |
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| [GENE] sort1a (15) | RNA | RefSeq:XM_005172902 | 4713 |
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| RNA | RefSeq:NM_213230 | 3247 |
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| RNA | GenBank:GFIL01039273 | 4910 |
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| RNA | GenBank:BC068433 | 3277 |
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| Genomic | GenBank:BX248230 | 217432 | Blast at MegaBLAST | |
| Genomic | GenBank:BX465223 | 183229 | ||
| Polypeptide | UniProtKB:A0A0R4IEP6 | 815 |
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| Polypeptide | UniProtKB:Q6NUT7 | 814 |
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| Polypeptide | RefSeq:XP_005172959 |
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| Polypeptide | RefSeq:NP_998395 | 814 |
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| Polypeptide | GenPept:Q6NUT7 | 814 |
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| Polypeptide | GenPept:AAH68433 | 814 |
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| [GENE] sypl2a (10) | RNA | RefSeq:NM_200667 | 4664 |
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| RNA | GenBank:GDQH01000710 | 4356 |
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| RNA | GenBank:BC058043 | 3920 |
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| RNA | GenBank:BC044419 | 2525 |
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| RNA | GenBank:EH441250 | 950 |
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| RNA | GenBank:BM958377 | 662 |
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| Genomic | GenBank:BX248230 | 217432 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:F1Q7F9 | 235 |
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| Polypeptide | RefSeq:NP_956961 |
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| Polypeptide | GenPept:AAH58043 | 235 |
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| [GENE] zbtb40 (8) | RNA | RefSeq:XM_005172915 | 4750 |
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| RNA | RefSeq:XM_694726 | 4747 |
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| RNA | RefSeq:XM_021472500 | 1595 |
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| RNA | GenBank:GDQH01005904 | 5335 |
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|
| RNA | GenBank:CK680595 | 767 |
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|
| RNA | GenBank:EB930492 | 648 |
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| Genomic | GenBank:BX248230 | 217432 | Blast at MegaBLAST | |
| Genomic | GenBank:CU928222 | 109067 | ||
| Polypeptide | UniProtKB:A0A8M2BKP8 | 1061 |
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| Polypeptide | UniProtKB:E7F660 | 1060 |
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| Polypeptide | UniProtKB:A0A8M9Q3U6 | 212 |
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| Polypeptide | RefSeq:XP_699818 |
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| Polypeptide | RefSeq:XP_021328175 |
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| Polypeptide | RefSeq:XP_005172972 |
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