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ZIRC
ZFIN ID: ZDB-GENE-040625-96
Gene Name: proteasome 20S subunit alpha 5
Gene Symbol: psma5
Sequence Ontology ID : SO:0001217

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Previous Name: zgc:86851 (1)

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have endopeptidase activity. Predicted to be involved in proteasomal ubiquitin-independent protein catabolic process and proteasome-mediated ubiquitin-dependent protein catabolic  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6907330]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10901 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19010 Point Mutation Unknown Splice Site ENU
    sa21956 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa30952 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH psma5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH psma5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process proteasome-mediated ubiquitin-dependent protein catabolic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function endopeptidase activity (more)
    GO Terms (all 15)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA psma5-201 (1) 1131
    psma5-202 (1) 861
    psma5-203 (1) 761
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM psma5 No data available
    MARKER RELATIONSHIPS
    psma5 Contained in: [BAC] CH211-213O11 (1) (order this)
    psma5 Encodes: [EST] IMAGE:6907330 (1) (order this)
    [cDNA] MGC:86851 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_205708 (1) 1104 bp
    Genomic GenBank:BX248230 (1) 217432 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q6TGV6 (1) 241 aa
    Sequence Clusters UniGene:76610 (1)
    Sequence Information (all 18)
    ORTHOLOGY for psma5 ( Chr: 11 )
    CITATIONS (27)