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General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-1434
Gene Name: synaptophysin-like 2a
Gene Symbol: sypl2a
Sequence Ontology ID : SO:0001217

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Previous Names: sypl, wu:fd54d09, zgc:65838

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have syntaxin-1 binding activity. Predicted to localize to the synaptic vesicle membrane. Is expressed in pronephric duct. Orthologous to human SYPL1 (synaptophysin like 1) and SYPL2  ...
GENE EXPRESSION
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2004 [IMAGE:6900926]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa41888 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41889 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sypl2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sypl2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    Molecular Function syntaxin-1 binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001285 (1)
  • InterPro:IPR008253 (1)
  • PROSITE:PS51225 (1)
  • Pfam:PF01284 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sypl2a-201 (1) 4630
    aberrant processed transcript sypl2a-202 (1) 487
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sypl2a No data available
    MARKER RELATIONSHIPS
    sypl2a Contained in: [BAC] CH211-213O11 (1) (order this)
    sypl2a Encodes: [EST] fd54d09 (1), IMAGE:6900926 (1) (order this)
    [cDNA] MGC:65838 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200667 (1) 3920 bp
    Genomic GenBank:BX248230 (1) 217432 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1Q7F9 (1) 235 aa
    Sequence Clusters UniGene:20951 (1)
    Sequence Information (all 16)
    ORTHOLOGY for sypl2a ( Chr: 11 )
    CITATIONS (20)