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General Information
ZIRC
ZFIN ID: ZDB-GENE-980526-330
Gene Name: caudal type homeobox 4
Gene Symbol: cdx4
GO Details
Ontology Qualifier Term Evidence Inferred From Annotation Extension Reference(s)
Molecular Function chromatin binding IDA Paik et al., 2013
DNA binding IDA Davidson et al., 2003
DNA binding IEA InterPro:IPR000047 ZFIN Electronic Annotation
DNA binding IEA InterPro:IPR001356 ZFIN Electronic Annotation
DNA binding IEA InterPro:IPR009057 ZFIN Electronic Annotation
DNA binding IEA InterPro:IPR020479 ZFIN Electronic Annotation
DNA binding IEA UniProtKB-KW:KW-0238 ZFIN Electronic Annotation
DNA binding IEA UniProtKB-KW:KW-0371 ZFIN Electronic Annotation
DNA-binding transcription factor activity IBA FB:FBgn0000251, MGI:MGI:88360, MGI:MGI:88361, PANTHER:PTN001216652, RGD:621234, WB:WBGene00003912 Gaudet et al., 2010
RNA polymerase II regulatory region sequence-specific DNA binding IBA FB:FBgn0000251, UniProtKB:Q99626, PANTHER:PTN001216652, UniProtKB:O14627, UniProtKB:P47902, WB:WBGene00003912 Gaudet et al., 2010
sequence-specific DNA binding IEA InterPro:IPR017970 ZFIN Electronic Annotation
Cellular Component nucleus IBA FB:FBgn0000251, MGI:MGI:88361, PANTHER:PTN001216652, RGD:621234, WB:WBGene00003912 Gaudet et al., 2010
nucleus IEA InterPro:IPR006820 ZFIN Electronic Annotation
nucleus IEA UniProtKB-KW:KW-0539 ZFIN Electronic Annotation
Biological Process animal organ morphogenesis IBA MGI:MGI:88360, PANTHER:PTN001216652 Gaudet et al., 2010
anterior/posterior axis specification IBA PANTHER:PTN001216652 Gaudet et al., 2010
anterior/posterior axis specification IGI MO2-cdx1a, cdx4tv205c/tv205c , hoxb7a Davidson et al., 2006
anterior/posterior axis specification IGI MO2-cdx1a, cdx4tv205c/tv205c , hoxa9a Davidson et al., 2006
anterior/posterior pattern specification IGI cdx4tv205c/tv205c (TU), MO2-cdx1a Wingert et al., 2007
anterior/posterior pattern specification IGI cdx4hi2188aTg/hi2188aTg , MO1-cdx1a Kinkel et al., 2008
anterior/posterior pattern specification IMP MO1-cdx4 Kinkel et al., 2008
anterior/posterior pattern specification IMP cdx4hi2188aTg/hi2188aTg Kinkel et al., 2008
anterior/posterior pattern specification IMP cdx4tv205c/tv205c Muncan et al., 2007
cell differentiation IBA MGI:MGI:88361, PANTHER:PTN001216652 Gaudet et al., 2010
embryonic foregut morphogenesis IMP cdx4hi2188aTg/hi2188aTg Kinkel et al., 2008
hemopoiesis IGI MO2-cdx1a, cdx4tv205c/tv205c Davidson et al., 2006
hindbrain-spinal cord boundary formation IMP MO1-cdx4 Skromne et al., 2007
multicellular organism development IEA InterPro:IPR006820 ZFIN Electronic Annotation
pancreas development IGI cdx4hi2188aTg/hi2188aTg , MO1-cdx1a Kinkel et al., 2008
pancreas development IMP cdx4hi2188aTg/+ Kinkel et al., 2008
pancreas development IMP cdx4hi2188aTg/hi2188aTg Kinkel et al., 2008
pancreatic D cell differentiation IMP cdx4tv205c/tv205c TarifeƱo-Saldivia et al., 2017
post-anal tail morphogenesis IMP cdx4tl240a/tl240a Hammerschmidt et al., 1996
pronephros development IGI cdx4tv205c/tv205c (TU), MO2-cdx1a Wingert et al., 2007
pronephros development IMP cdx4tv205c/tv205c (TU) Wingert et al., 2007
regulation of gene expression IMP cdx4hi2188aTg/hi2188aTg Hayward et al., 2015
regulation of gene expression IMP cdx4tv205c/tv205c Hayward et al., 2015
regulation of transcription by RNA polymerase II IBA FB:FBgn0000251, UniProtKB:Q99626, MGI:MGI:88360, MGI:MGI:88361, MGI:MGI:88362, PANTHER:PTN001216652, UniProtKB:O14627, UniProtKB:P47902, WB:WBGene00003912 Gaudet et al., 2010
regulation of transcription, DNA-templated IEA InterPro:IPR006820 ZFIN Electronic Annotation
regulation of transcription, DNA-templated IEA InterPro:IPR017970 ZFIN Electronic Annotation
retinoic acid receptor signaling pathway IGI cdx4tv205c/tv205c (TU), MO2-cdx1a Wingert et al., 2007
rostrocaudal neural tube patterning IGI MO1-cdx4, MO1-cdx1a Shimizu et al., 2006
somitogenesis IGI MO1-cdx1a Shimizu et al., 2005