Genomic Feature
n1
- ID
- ZDB-ALT-980203-470
- Name
- n1
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- spontaneous
- Lab of Origin
- Jowett Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) (order this)
- Other Pages
- Note
-
Two C residues at positions 211 and 212 of the wild-type coding sequence are deleted, resulting in a frameshift after the leucine residue at position 70 in the ORF.2-bp deletion
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 13: 14976378 - 14976379 (GRCz11) (1) Details
- Nucleotide change
- CC/-
- Variant Notes
-
2-bp deletion
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 2 bp deleted (1)
- Transcript Consequence
- Frameshift (1)
- Protein Consequence
- None
- Flanking Sequence
-
TTTCTGGACTACCTCCGGGGGCATGTAGCGCAGAGGGCCATTAGGATATTTGACAATCTCAGCTTGTTACAACTCCATCAGTTAATTGGATCCCTTGTAGAGCCGCTCGTTTGACTCATCTGCCACTTAAAAATACAAAGGCGCGCTGGGGGTCGTTCACACCTCGCGCCCTAGAGCAGGTATAAAAGACCCGCTGCCTCACCAACTTCATTCCACTCCTGATATTAGGGTCGAGAACTTCGAAGGATATCTTTTTTTTTTTTTAGTTGCTTTTTGGACTAAACAGACGCCATGCAGATTCCCGGAAGAGCTTACGAAACTTATGGACAATCAGCACGTCCTTTGCATCAGGACTATGCCACCTCTTCTTCAAAACCGAGCACCGGGAAATCATTCACCATAGACGCTCTGCTCGCGAGGCCTGACCAGGCGGAGATGAGAGAACGAACAAACGCGTACCGGAGCATAACCAACCAAACGTCTGTCTCCAGCTCTGCGCT
CC/- CGCTTATTTACTCGCAGATGCCACACTTCGCGTACAGCCAAAGCATCATGCAAACTCAGACAGGCTATCCCGTGTTCTGCTATCCGCCCTACAACTTCCAAACAACATGTCGTGGAGCTGTGTACGCACAAGGTATAAAGGCTAGGTTTTAATGAATGTAGCTAAGAATAGAAATTATTTTAATGATACTTCAAATATGATTTCCTAACCAATGCGTTCTTTTGTTTTTCGCACCCACAGATGCAGTACTGGCGAAAGCAGCAGTTCATTCTCATTATAAACACAAATCTGGGAAATCAAAGCGAATGCGTACAAGTTTTACCAACGATCAGCTGTCCAGACTGGAGAAAGAGTTCGCGCGGCAGCAATACATGGTGGGATCTGAACGCTTTCTGTTGGCATCTGCTCTCCAACTCACTGAAGCTCAGGTAAATAAATTACATGGTATGACAAAATTTTAGATTGACTTTTGCTTTCGGTTTAATTCCAAATATGTACAA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- n1.pdf