ZFIN Feature: n1

ZFIN ID: ZDB-ALT-980203-470

ZFIN ID: ZDB-ALT-980203-470

Genomic Feature:	n1
Synonyms:
Affected Genomic Regions:	noto
Type:	Small Deletion (1)
Protocol:	spontaneous
Lab Of Origin:	Jowett Lab
Location:	Chr 13: 14976378 - 14976379 (GRCz11) (1) Details
Sequence:
Current Sources:	Zebrafish International Resource Center (ZIRC) (order this)

MUTATION DETAILS

DNA/cDNA Change:	2 bp deleted (1)
Transcript Consequence:	Frameshift (1)

FLANKING SEQUENCE (GENOMIC)

TTTCTGGACTACCTCCGGGGGCATGTAGCGCAGAGGGCCATTAGGATATTTGACAATCTCAGCTTGTTACAACTCCATCAGTTAATTGGATCCCTTGTAGAGCCGCTCGTTTGACTCATCTGCCACTTAAAAATACAAAGGCGCGCTGGGGGTCGTTCACACCTCGCGCCCTAGAGCAGGTATAAAAGACCCGCTGCCTCACCAACTTCATTCCACTCCTGATATTAGGGTCGAGAACTTCGAAGGATATCTTTTTTTTTTTTTAGTTGCTTTTTGGACTAAACAGACGCCATGCAGATTCCCGGAAGAGCTTACGAAACTTATGGACAATCAGCACGTCCTTTGCATCAGGACTATGCCACCTCTTCTTCAAAACCGAGCACCGGGAAATCATTCACCATAGACGCTCTGCTCGCGAGGCCTGACCAGGCGGAGATGAGAGAACGAACAAACGCGTACCGGAGCATAACCAACCAAACGTCTGTCTCCAGCTCTGCGCT

CC/-

CGCTTATTTACTCGCAGATGCCACACTTCGCGTACAGCCAAAGCATCATGCAAACTCAGACAGGCTATCCCGTGTTCTGCTATCCGCCCTACAACTTCCAAACAACATGTCGTGGAGCTGTGTACGCACAAGGTATAAAGGCTAGGTTTTAATGAATGTAGCTAAGAATAGAAATTATTTTAATGATACTTCAAATATGATTTCCTAACCAATGCGTTCTTTTGTTTTTCGCACCCACAGATGCAGTACTGGCGAAAGCAGCAGTTCATTCTCATTATAAACACAAATCTGGGAAATCAAAGCGAATGCGTACAAGTTTTACCAACGATCAGCTGTCCAGACTGGAGAAAGAGTTCGCGCGGCAGCAATACATGGTGGGATCTGAACGCTTTCTGTTGGCATCTGCTCTCCAACTCACTGAAGCTCAGGTAAATAAATTACATGGTATGACAAAATTTTAGATTGACTTTTGCTTTCGGTTTAATTCCAAATATGTACAA

Comment	Citation
2-bp deletion	ZFIN Staff
Two C residues at positions 211 and 212 of the wild-type coding sequence are ...	Talbot et al., 1995

OTHER n1 PAGES No links to external sites

GENOTYPES

Zygosity	Genotype (Background)	Affected Genomic Regions	Parental Zygosity
Homozygous	noto^n1/n1	noto	♀+/- ♂+/-
	noto^n1/n1 (AB)	noto	♀+/- ♂+/-
	noto^n1/n1 (AB/TL)	noto	♀+/- ♂+/-
Heterozygous	noto^n1/+	noto	♀+/- ♂+/-
	noto^n1/+ (AB/TL)	noto	♀+/- ♂+/-
	noto^n1/+ (AB)	noto	Unknown
Complex	tbx2b^c144/c144; noto^n1/n1	noto, tbx2b
	noto^n1/n1; ndr2^{Df(Chr12:hhex)b16/b16} (AB)	hhex, ndr2, noto
	noto^n1/n1; ndr2^{Df(Chr12:hhex)b16/b16}	hhex, ndr2, noto
	noto^n1/n1; shha^{Df(Chr07)t4/t4} (AB)	noto, shha
	notoⁿ¹; ndr2^{Df(Chr12:hhex)b16}	hhex, ndr2, noto
	noto^n1/+ ; sqet11Et	noto
	noto^n1/n1; sb15Tg	noto
	noto^n1/n1; zf104Tg	noto
	noto^n1/n1; zf5Tg	noto
	sqet11Et ; noto^n1/n1	noto
	notoⁿ¹; tbxta^b195	noto, tbxta
	noto^n1/n1; tdgf1^unspecified	noto, tdgf1
	tbx2b^c144/c144; noto^n1/n1; zf104Tg	noto, tbx2b
	noto^n1/n1; ndr2^{Df(Chr12:hhex)b16/b16}; shha^{Df(Chr07)t4/t4} (AB)	hhex, ndr2, noto, shha
	noto^n1/n1; s903Tg; zf5Tg	noto
	bsx^m1376/m1376 ; noto^n1/n1 (AB/TL)	bsx, noto
	noto^n1/+ ; bsx^m1376/m1376 (AB/TL)	bsx, noto
	noto^n1/n1; tbx16^b104/b104	noto, tbx16
Unknown	notoⁿ¹ (AB)	noto	Unknown
	notoⁿ¹	noto	Unknown

CITATIONS (80)