Genomic Feature

lri53

ID
ZDB-ALT-170314-3
Name
lri53
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Brian Perkins Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 17: 8259801 - 8259804 (GRCz11) (1) Details
Nucleotide change
TGGA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted in Exon 5 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
ACCCGGCTGATAAACGATATCATAAGGAATTGCGTTAAAATTTAAGTCAGTAACAATGATAAGCTCTGGACTTTTTTACTCTATATCGATCTAAGAGCCAATCACACTGCAGAAATGTGCAACAATGGGAACCTAAAAGTGTGTTGATATTAGAGATGTACTGAATATTCGGCCCCCAAAAGTTTATTTACCGAAAATGTTATGCCATTTAATGGACCCTCTAATTTTTGTGGCTTCTGTCATCTGGAATTTAAATCTGGAAGCATTAACAACTGATATCAAAATATATATCGTTATCATTCAATATGGAAAATAATTATCGAGACTGCATTTTTGCCATATCACCCCACCCTATGTAGAATGCAACACTGTGAATCGGCACAGTAAATCTATCATGGTGATGATATCAATGTAGACAGCTGATTATACCTTCTTTTCGTTTCTTTTTCTTCTTCACTTTGGGTTTGACTGTATCCTCCTTGAACTCCTCTACATCATCC
TGGA/- TGATTTCTGTCTGGTTTTCTGCTGACACTTCAGCCTGACTGCAGAGAAAGAGACAAGCCAAATTAAGAAAGAAAAAGAAAGAAAATCATGAAAACTAAAAACTGTGATCTCTTTATTTCATCCAATGCTTTAAGGCCACTTAAAGTTTGTGAAAAGTAAAATGTGTGATATATTCAGCTCTTGTATCACTAAACAAAATTGCAAAAAGCAAAAATTGTGTGGCTCTCAAACTTAAAGGTAGAAAAAAACACCTGTATTTTGTTAAAAAAAAAAAAAAGTACAGTTCACCCCAAAAATTTAATTTAATCTCTACTTACTCACCTCCAAGTGGTTCCAAACCTTTATGTTCTTCAATTAAACACAAAAGAAGATATTTTAAAGAATGCTGGAAACCTGCAACCATTGACTTCATTAATAGGAAAAATAAATACTAATGGGTTTTTTTAACCATTCTAAATGGTTTAGTTTCCCACTTAAAAAAAAAAATGTTTTTAACAGAA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations