ZFIN is now using GRCz12tu for Genomic Data
Gene
tmem50a
- ID
- ZDB-GENE-040426-2937
- Name
- transmembrane protein 50A
- Symbol
- tmem50a Nomenclature History
- Previous Names
-
- fj33b04
- wu:fj33b04
- zgc:55322 (1)
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in late endosome to vacuole transport via multivesicular body sorting pathway. Predicted to be located in membrane. Orthologous to human TMEM50A (transmembrane protein 50A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55322 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR007919 | Uncharacterised protein family UPF0220 |
Domain Details Per Protein
| Protein | Additional Resources | Length | Uncharacterised protein family UPF0220 |
|---|---|---|---|
| UniProtKB:Q803R8 | InterPro | 164 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
tmem50a-201
(1)
|
Ensembl | 1,678 nt | ||
| mRNA |
tmem50a-203
(1)
|
Ensembl | 1,687 nt | ||
| mRNA |
tmem50a-204
(1)
|
Ensembl | 582 nt | ||
| mRNA |
tmem50a-205
(1)
|
Ensembl | 503 nt | ||
| ncRNA |
tmem50a-002
(1)
|
Ensembl | 923 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers