ZFIN Transcript: si:dkey-178k16.1-202

ZFIN ID: ZDB-TSCRIPT-090929-22285

ZFIN ID: ZDB-TSCRIPT-090929-22285

Transcript Name:

si:dkey-178k16.1-202

Previous Names:

ottdart00000042585, si:dkey-178k16.1-002

Transcript Type:

mRNA

Annotation Status:

Strain:

Non Reference Strains:

Associated with Genes:

si:dkey-178k16.1 (1)

SEQUENCE

OTTDART00000042585 (1) [ Show ] (double-click sequence to select)

[Download]

Select Analysis Tool

ZFIN BLAST

NCBI BLAST

Ensembl

UCSC BLAT

>tpe|OTTDART00000042585|OTTDARG00000030691|ZDB-GENE-090312-61 si:dkey-178k16.1|OTTDARP00000033842 DKEY-178K16.1-002 LG_none CR394557.6,CR735125.12 Danio rerio protein_coding NOVEL, 1736 bp
CCATCCACCCGAGAGCTGCTCTTCCCCCTCCGCCCGCTCA
TTCATCCTCTCGGACAGTCAGTCTCCATCCTCTGACGGAG
AACAGAAGCAGCAGGGCGGTGGCAGCCGAAGCCCTCAATG
GTCGGCATTTGGACGGAAATCCGCGCGTCAAACCTGGAGA
GACAGGACTGCAAGTGATTGCTATGTCAGAGAGAAATTCA
GCCACCAAGAACCCAGCAGACGGAGGTTTTACGGATCACG
ATTCAAAGATGTCAGATGAGCACCGAGACACGGATGATTC
GTCTGAGAAAACACCCAGTAGGATGTCCAGATCACCACAG
AAATCCAAAAGACCAAAGACGGTGCCTGTGAAAGTCCTGC
TGCTGGACGGCTCGGCCTACGAGAGCGGCGTTGAGAAGCT
CTGTAAAGGACAAGTGTTACTGGATATGGTGTGTGAACAT
CTCAACCTGTTGGAGAAGGACTACTTTGGTCTGAGCTTTA
GTGACACGGAGTGTCAGAAGAATTGGCTCGATCCTTCAAA
AGAAATCAAGAAACAAATCCGTGTGGGTCCTTGGCATTTC
TCCTTTGCTGTCAAGTTCTATCCCCCTGATCCGTCTCAGC
TGATTGAAGACATCACACGGTATTACCTGTGTCTGCAGCT
GAGGGAGGACATTCTGTCAGGTCGTTTGCCCTGCTCGTTC
GTCACTCATGCTCTACTGGGCTCATACGCCATTCAGGCTG
AGCTGGGAGACTATGACCCCGAGGAACACGGGCCAGACTA
CATCAACGAGTTCCGCTTTGCCCCCAATCAGACTCGCGAG
CTGGAGGAAAGGGTGATGGAGCTGCACCGCACCTACAGGG
GTATGAGTCCTGCAGAGGCTGAAATCAACTTCCTGGAGAA
TGCCAAGAAACTCTCCATGTATGGCGTTGATCTCCATCAT
GCTAAGGACTCTGAAGGTATCGACATCATGCTGGGGGTTT
GTGCCAGTGGCCTTTTGATCTACAGAGACAGGCTGCGCAT
CAACCGATTCGCCTGGCCCAAGATCCTCAAAATATCATAC
AAGAGAAGCAACTTTTACATCAAAATCCGACCTGGAGAGT
ACGAGCAGTTTGAGAGCACCATTGGCTTCAAGCTGCCCAA
CCACCGTGCCTCTAAGCGCTTGTGGAAGGTCTGCATTGAA
CACCACACATTTTTCAGGTTGGTCTCTCCTGAGCCTCCCC
CAAAAGGTTTTCTTGTGATTGGCTCAAAGTTCCGCTATAG
TGGACGAACCCAAGCCCAGAGCCGACAGGCTAGTGCTTTG
ATTGACAGGCCAGCTCCTCAATTTGAACGATCCATTAGTA
GAAGGTACCTGTTGTCCCGCAGCATAGACGGAGAGTCTGC
TTTAGGGGACACCATGGACCGACTCTCTCAGCACACTTCC
AGTGAGCCTGTGCCTAGTCTTCCTAGAGATGAGCTGGACC
AGGACTACCTAGAGCCCAGTCTAGATCAGGACCTGGACCA
AGATCATGAACAAGAAGAAGAACAGCGACTAGAGAGTGAC
TCCACTCCCTCTAAAACGGTGGAGCTCAAGAGGGAGGAGG
CAGGTTCTCCTGTAGACTCTAAGACAGAGCAGTTCCTGGA
TAAACCAGAGGATGTGTTGCAGAAACATCAAGCCAGCATC
AATGAGCTGAAAAGAGCGCTGAGGGAGCCCAACAGCAAAC
TGGTCCACAGAGAAAAACGTCTCTCTGGAGCCTCATCTGG
TAGCACTCCGGAGAAA

si:dkey-178k16.1 TRANSCRIPTS
Type	Name	Length (bp)	Analysis
ncRNA	si:dkey-178k16.1-003 (1)	573	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	si:dkey-178k16.1-202	1736
	si:dkey-178k16.1-203 (1)	2544	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

SEGMENT (CLONE AND PROBE) RELATIONSHIPS

si:dkey-178k16.1-202 Contained in:

[BAC] CH211-247H9 (1) (order this), DKEY-178K16 (1) (order this)

OTHER si:dkey-178k16.1-202 TRANSCRIPT PAGES

Vega_Trans:OTTDART00000042585 (1)

Ensembl_Trans:ENSDART00000134652 (1)

PROTEIN PRODUCTSNo links to external site

ZEBRAFISH SUPPORTING SEQUENCES

Type	Accession #	Length (bp/aa)	Analysis
RNA	GenBank:EB948890 (1)	599bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AL909644 (1)	458bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AL909645 (1)	427bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EB777969 (1)	421bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EB779056 (1)	371bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

CITATIONS (2)

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