Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-990714-16
Gene Name: aryl hydrocarbon receptor 2
Gene Symbol: ahr2
Previous Names: AHR1b (1), ahrb
Location: Chr: 22   Details
GENE EXPRESSION
All Expression Data: 14 figures from 9 publications
Wild-type Stages, Structures: Segmentation:5-9 somites (11.66h-14.0h) to Adult (90d-730d, breeding adult)
  brain, caudal artery, caudal vein plexus, cerebellum (all 33) expand
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Mutant lines: 3 genotypes
Alleles: hu3335, la014154Tg, la022159Tg, la022161Tg, la022162Tg (all 7) expand
Knockdown reagents: MO1-ahr2 (2)
PHENOTYPE
Data: Fig. 2 from Goodale et al., 2012
Observed in: dentary, ethmoid cartilage, fin, gill (all 13) expand
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular response to xenobiotic stimulus (more)
Cellular Component cytoplasm (more)
Molecular Function aryl hydrocarbon receptor activity (more)
GO Terms (all 21)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000014 (1)
  • InterPro:IPR001610 (1)
  • InterPro:IPR011598 (1)
  • InterPro:IPR013655 (1)
  • InterPro:IPR013767 (1)
  • PROSITE:PS50112 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00989 (1)
  • Pfam:PF08447 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ahr2-001 (1) 7511
    GENE PRODUCT DESCRIPTION
    ANTIBODIES
    Ab1-ahr2 (1)
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ahr2
    Tg(Xla.Eef1a1:dnahr2-MYC)
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    ahr2 Contained in: [BAC] DKEY-74I2 (1)
    ahr2 Encodes: [cDNA] MGC:194789 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131264 (1) 7126 bp
    Genomic GenBank:BX908726 (1) 180599 bp
    Select Tool
    Polypeptide UniProtKB:B3DK40 (1) 1027 aa
    Sequence Clusters UniGene:79593 (1)
    Sequence Information (all 13)
    OTHER ahr2 GENE PAGES
  • Gene:30517 (1)
  • VEGA:OTTDARG00000016665 (1)
  • Ensembl(Zv9):ENSDARG00000021833 (1)
  • ORTHOLOGY No data available
    CITATIONS (85)