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ZIRC
ZFIN ID: ZDB-GENE-990708-7
Gene Name: orthopedia homeobox b
Gene Symbol: otpb
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: otp1 (1), otp, otpa, cb977 (1), otp a

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have sequence-specific DNA binding activity. Involved in forebrain neuron development; hypothalamus development; and mammillary body development. Predicted to localize to the nucleus. Is  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
az9 Small Deletion Unknown Unknown CRISPR
az10 Small Deletion Unknown Unknown CRISPR
sa115 Small Deletion Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa8966 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12381 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45228 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH otpb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH otpb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process forebrain neuron development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 11)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA otpb-201 (1) 1845
    otpb-202 (1) 1825
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    MARKER RELATIONSHIPS
    otpb Contained in: [BAC] CH211-194B21 (1) (order this)
    otpb Encodes: [EST] cb977 (1) (order this)
    [cDNA] MGC:92914 (1) (order this), MGC:191282 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131100 (1) 1880 bp
    Genomic GenBank:BX470070 (1) 228177 bp Blast at MegaBLAST
    Polypeptide UniProtKB:B0S6A5 (1) 315 aa
    Sequence Clusters UniGene:81295 (1)
    Sequence Information (all 21)
    ORTHOLOGY for otpb ( Chr: 5 )
    CITATIONS (64)