ZFIN ID: ZDB-GENE-990415-272
Gene Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Gene Symbol: ddx4
Previous Names: vas, vasa, vlg, wu:fi24g05, zgc:109812, zgc:158535
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 91 figures from 56 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
  blastodisc, blastodisc P granule, blastodisc cleavage furrow, blastodisc cytoplasmic part (all 41) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9472 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa15900 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-ddx4 (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ddx4 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process gonad development (more)
    Cellular Component P granule (more)
    Molecular Function ATP binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000629 (1)
  • InterPro:IPR001650 (1)
  • InterPro:IPR011545 (1)
  • InterPro:IPR014001 (1)
  • InterPro:IPR014014 (1)
  • InterPro:IPR027417 (1)
  • PROSITE:PS00039 (1)
  • PROSITE:PS51192 (1)
  • PROSITE:PS51194 (1)
  • PROSITE:PS51195 (1)
  • Pfam:PF00270 (1)
  • Pfam:PF00271 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ddx4-001 (1) 2856
    ddx4-002 (1) 2519
    ddx4-003 (1) 2787
    ncRNA ddx4-004 (1) 1314
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIES
    Ab1-ddx4 (1), Ab2-ddx4 (1)
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ddx4
    Tg(vasa:DsRed2-vasa), Tg(vasa:vasa-EGFP)
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    ddx4Contained in: [BAC] CH73-194F17 (1) (order this), DKEY-117I20 (1) (order this)
    ddx4Encodes: [EST] fi24g05
    [cDNA] MGC:109812 (1) (order this), MGC:158535 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131057 (1) 2865bp
    Genomic GenBank:BX571726 (1) 106819bp
    Select Tool
    Polypeptide UniProtKB:F1QES3 (1) 716aa
    Sequence Clusters UniGene:559 (1)
    Sequence Information (all 45)
    OTHER ddx4 GENE PAGES
  • Gene:30263 (1)
  • VEGA:OTTDARG00000035216 (1)
  • Ensembl(GRCz10):ENSDARG00000014373 (1)
  • ORTHOLOGY for ddx4 (Chr: 10)
    Species Symbol Chromosome Accession # Evidence
    Human DDX4 5
  • Gene:54514
  • OMIM:605281
  • HGNC:18700
  • Amino acid sequence comparison (2)
    Conserved genome location (synteny) (1)
    Mouse Ddx4 13
  • MGI:102670
  • Gene:13206
  • Amino acid sequence comparison (5)
    Download Curated Orthology
    CITATIONS (136)