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ZIRC
ZFIN ID: ZDB-GENE-990415-128
Gene Name: SIX homeobox 3b
Gene Symbol: six3b
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: six3.2, six6 (1), cb347 (1)

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and transcription regulatory region sequence-specific DNA binding activity. Involved in embryonic camera-type  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ja53 Small Deletion Exon 1 Unknown TALEN
ja55 Small Deletion Exon 1 Unknown TALEN
sa24913 Point Mutation Unknown Premature Stop ENU
sa35303 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • vu87 Point Mutation Unknown Premature Stop ENU
    Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH six3b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    holoprosencephaly 2 Holoprosencephaly 2 157170
    Schizencephaly 269160
    DISEASE ASSOCIATED WITH six3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process embryonic camera-type eye morphogenesis (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 14)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA six3b-201 (1) 1759
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM six3b
    MARKER RELATIONSHIPS
    six3b Contained in: [BAC] DKEY-250C11 (1) (order this)
    six3b Encodes: [EST] cb347 (1) (order this), fa01b08
    [cDNA] MGC:73043 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131363 (1) 1722 bp
    Genomic GenBank:CR932018 (1) 137736 bp
    Select Tool
    Polypeptide UniProtKB:O73709 (1) 293 aa
    Sequence Clusters UniGene:75402 (1)
    Sequence Information (all 17)
    ORTHOLOGY for six3b ( Chr: 12 )
    CITATIONS (112)