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ZIRC
ZFIN ID: ZDB-GENE-990415-101
Gene Name: homeobox B1a
Gene Symbol: hoxb1a
Sequence Ontology ID : SO:0000704

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Previous Names: hoxb1, etID309950.3 (1), id:ibd3532, sb:eu402, Z-3

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits sequence-specific DNA binding activity. Involved in central nervous system development. Predicted to localize to the nucleus. Orthologous to human HOXB1 (homeobox B1).
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1191 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31326 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33162 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • um189 Small Deletion Exon 1 Unknown TALEN
    um190 Indel Exon 1 Unknown TALEN
    um191 Indel Exon 1 Unknown TALEN
    um192 Indel Exon 1 Unknown TALEN
    um193 Small Deletion Exon 1 Unknown TALEN
    um194 Indel Exon 1 Unknown TALEN
    Targeting reagents:
    DISEASE ASSOCIATED WITH hoxb1a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Facial paresis, hereditary congenital, 3 614744
    DISEASE ASSOCIATED WITH hoxb1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process rhombomere 4 development (more)
    Cellular Component nucleus (more)
    Molecular Function sequence-specific DNA binding (more)
    GO Terms (all 11)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hoxb1a-201 (1) 1507
    ottdart00000001810 (1) 1860
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    MARKER RELATIONSHIPS
    hoxb1aContained in: [BAC] DKEY-178D9 (1) (order this)
    [PAC] BUSM1-254O17 (2) (order this)
    hoxb1aEncodes: [EST] eu402 (1), ibd3532 (1) (order this)
    [cDNA] MGC:194377 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131115 (1) 957bp
    Genomic GenBank:AL645782 (1) 119385bp
    Select Tool
    Polypeptide UniProtKB:B3DHZ4 (1) 316aa
    Sequence Clusters UniGene:83326 (1)
    Sequence Information (all 21)
    ORTHOLOGY for hoxb1a (Chr: 3)
    CITATIONS (140)